RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 RAD23BP54727 409 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 ARHGAP8P85298 464 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 FOXK2Q01167 660 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 TMEM25Q86YD3 366 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 MIB1Q86YT6 1006 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 ZC3H3Q8IXZ2 948 aaKnown RBP18.62■□□□□ 0.57
NME3-205ENST00000563854 KLF16Q9BXK1 252 aaPredicted RBP18.62■□□□□ 0.57
NME3-205ENST00000563854 ARRDC1-AS1Q9H2J1 176 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 CYLDQ9NQC7 956 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 SPHK2Q9NRA0 654 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 DLL3Q9NYJ7 618 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 CIZ1Q9ULV3 898 aaPredicted RBP18.62■□□□□ 0.57
NME3-205ENST00000563854 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.61■□□□□ 0.57
NME3-205ENST00000563854 NEDD8-MDP1E9PL57 170 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 BIN1O00499 593 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 DCLK1O15075 740 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 CD19P15391 556 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 CD44P16070 742 aaKnown RBP18.61■□□□□ 0.57
NME3-205ENST00000563854 GBP1P32455 592 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 GRIA2P42262 883 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 KIF11P52732 1056 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 CUL2Q13617 745 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 GOLGA7BQ2TAP0 167 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 EMC10Q5UCC4 262 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 PRR23CQ6ZRP0 262 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 TPGS1Q6ZTW0 290 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 TXNDC5Q8NBS9 432 aaKnown RBP18.61■□□□□ 0.57
NME3-205ENST00000563854 SLC35C1Q96A29 364 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.61■□□□□ 0.57
NME3-205ENST00000563854 RASAL2Q9UJF2 1139 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 DNMT3LQ9UJW3 386 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 MMP17Q9ULZ9 603 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 CTNND2Q9UQB3 1225 aa18.61■□□□□ 0.57
NME3-205ENST00000563854 TBC1D3BA6NDS4 549 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 HOXC11O43248 304 aaPredicted RBP18.6■□□□□ 0.57
NME3-205ENST00000563854 LRP3O75074 770 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 GADD45BO75293 160 aaPredicted RBP18.6■□□□□ 0.57
NME3-205ENST00000563854 TULP3O75386 442 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 HMBSP08397 361 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 RALAP11233 206 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 SDHBP21912 280 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 SLC8A3P57103 927 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 MCCD1P59942 119 aaPredicted RBP18.6■□□□□ 0.57
NME3-205ENST00000563854 MRPS21P82921 87 aaKnown RBP18.6■□□□□ 0.57
NME3-205ENST00000563854 CSRP2Q16527 193 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 CCDC186Q7Z3E2 898 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 SCD5Q86SK9 330 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 TADA2BQ86TJ2 420 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 BHMTQ93088 406 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 DHTKD1Q96HY7 919 aaPredicted RBP18.6■□□□□ 0.57
NME3-205ENST00000563854 FAXDC2Q96IV6 333 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 DNAJC17Q9NVM6 304 aaKnown RBP18.6■□□□□ 0.57
NME3-205ENST00000563854 DEC1Q9P2X7 70 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 MYOFQ9NZM1 2061 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 EML5Q05BV3 1969 aa18.6■□□□□ 0.57
NME3-205ENST00000563854 MED19A0JLT2 244 aaPredicted RBP18.59■□□□□ 0.57
NME3-205ENST00000563854 SGK1O00141 431 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 EPN2O95208 641 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 YWHAEP62258 255 aaKnown RBP18.59■□□□□ 0.57
NME3-205ENST00000563854 SF3A2Q15428 464 aaKnown RBP18.59■□□□□ 0.57
NME3-205ENST00000563854 ELF2Q15723 593 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 AASDHQ4L235 1098 aaPredicted RBP18.59■□□□□ 0.57
NME3-205ENST00000563854 C10orf76Q5T2E6 689 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 ARHGAP17Q68EM7 881 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 HTR3DQ70Z44 454 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 PIGZQ86VD9 579 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 ETFBKMTQ8IXQ9 262 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 C12orf50Q8NA57 414 aaPredicted RBP18.59■□□□□ 0.57
NME3-205ENST00000563854 IL17RCQ8NAC3 791 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 NELFBQ8WX92 580 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 BBS2Q9BXC9 721 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 SMOC1Q9H4F8 434 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 METTL14Q9HCE5 456 aaKnown RBP18.59■□□□□ 0.57
NME3-205ENST00000563854 BCCIPQ9P287 314 aaKnown RBP eCLIP18.59■□□□□ 0.57
NME3-205ENST00000563854 EBF1Q9UH73 591 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 COQ4Q9Y3A0 265 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 CEP250Q9BV73 2442 aa18.59■□□□□ 0.57
NME3-205ENST00000563854 TRIM24O15164 1050 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 GDF9O60383 454 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 ALDH1A2O94788 518 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 PPP1R2P41236 205 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 PLA2G4AP47712 749 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 FMO5P49326 533 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 PSEN1P49768 467 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 TKTL1P51854 596 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 ATXN1P54253 815 aaKnown RBP18.58■□□□□ 0.56
NME3-205ENST00000563854 STX17P56962 302 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 EFEMP1Q12805 493 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 CRY1Q16526 586 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 PLK5Q496M5 336 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 PREPLQ4J6C6 727 aaPredicted RBP18.58■□□□□ 0.56
NME3-205ENST00000563854 USP39Q53GS9 565 aaKnown RBP18.58■□□□□ 0.56
NME3-205ENST00000563854 SGO2Q562F6 1265 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 EOGTQ5NDL2 527 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 GRAMD4Q6IC98 578 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 TMEM92Q6UXU6 159 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 RSRC2Q7L4I2 434 aaKnown RBP18.58■□□□□ 0.56
NME3-205ENST00000563854 PHTF2Q8N3S3 785 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 MDGA1Q8NFP4 955 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 CEP63Q96MT8 703 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms