RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 JOSD2Q8TAC2 188 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 HASPINQ8TF76 798 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 FUBP3Q96I24 572 aaKnown RBP eCLIP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 KRT12Q99456 494 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 KLF16Q9BXK1 252 aaPredicted RBP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 RAB17Q9H0T7 212 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 NRDE2Q9H7Z3 1164 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 ZFAND3Q9H8U3 227 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 CSNK1G1Q9HCP0 422 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 CNGB3Q9NQW8 809 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 RRN3Q9NYV6 651 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 EHD2Q9NZN4 543 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 CACNG4Q9UBN1 327 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 STAP1Q9ULZ2 295 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 FAN1Q9Y2M0 1017 aa10.15□□□□□ -0.78
UBFD1-202ENST00000563366 TIMM13Q9Y5L4 95 aaPredicted RBP10.15□□□□□ -0.78
UBFD1-202ENST00000563366 VWA8A3KMH1 1905 aa10.15□□□□□ -0.79
UBFD1-202ENST00000563366 MYO16Q9Y6X6 1858 aa10.15□□□□□ -0.79
UBFD1-202ENST00000563366 MYBPHLA2RUH7 354 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 TBKBP1A7MCY6 615 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 F8VP50 259 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 H7C4K7 107 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 NRP1O14786 923 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 ATP8B1O43520 1251 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 HCRTO43612 131 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 PRPSAP2O60256 369 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 ATP2C2O75185 946 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 DAB1O75553 588 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 HEXIM1O94992 359 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 TJP3O95049 919 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 HSPA1AP0DMV8 641 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 HSPA1BP0DMV9 641 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 LCP1P13796 627 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 RAG1P15918 1043 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 TKTP29401 623 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 ALDH7A1P49419 539 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 RNASE9P60153 205 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 YWHAZP63104 245 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 MRPS5P82675 430 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 OGDHQ02218 1023 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 SLC25A11Q02978 314 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 LMNB2Q03252 620 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 ADIGQ0VDE8 80 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 CYP1B1Q16678 543 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 BOLA3Q53S33 107 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 TFDP3Q5H9I0 405 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 FBXO38Q6PIJ6 1188 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 VSTM1Q6UX27 236 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 CD300LGQ6UXG3 332 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 Q6ZVU0 165 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 STRADAQ7RTN6 431 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 MAP7D3Q8IWC1 876 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 EMC1Q8N766 993 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 DIS3LQ8TF46 1054 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 GRK7Q8WTQ7 553 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 TEKT4Q8WW24 435 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 RXFP2Q8WXD0 754 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 IRGQQ8WZA9 623 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 MYLPFQ96A32 169 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 LRRC1Q9BTT6 524 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 AP1M1Q9BXS5 423 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 B3GNT5Q9BYG0 378 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 FRMD8P1Q9BZ68 369 aaPredicted RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 OSBPL8Q9BZF1 889 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 SMARCAL1Q9NZC9 954 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 TJP2Q9UDY2 1190 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 DNAJB4Q9UDY4 337 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 STK39Q9UEW8 545 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 PCYOX1Q9UHG3 505 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 USP18Q9UMW8 372 aa10.14□□□□□ -0.79
UBFD1-202ENST00000563366 PRG3Q9Y2Y8 225 aaPredicted RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 UTP11Q9Y3A2 253 aaKnown RBP10.14□□□□□ -0.79
UBFD1-202ENST00000563366 BRCA2P51587 3418 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 I3L4J1 428 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 TULP2O00295 520 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 MDM4O15151 490 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 GJB6O95452 261 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 GAS8O95995 478 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 NOS2P35228 1153 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 GJC1P36383 396 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 FLT3P36888 993 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 MATKP42679 507 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 TKTL1P51854 596 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 AIF1P55008 147 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 MAP3K7CLP57077 242 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 TAS2R40P59535 323 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 DR1Q01658 176 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 CUL1Q13616 776 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 PDK2Q15119 407 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 LRRC26Q2I0M4 334 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 RAB41Q5JT25 222 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 MFSD5Q6N075 450 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 FUT10Q6P4F1 479 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 PAQR9Q6ZVX9 377 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 SYDE1Q6ZW31 735 aaPredicted RBP10.13□□□□□ -0.79
UBFD1-202ENST00000563366 ANKS3Q6ZW76 656 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 PSTKQ8IV42 348 aaKnown RBP10.13□□□□□ -0.79
UBFD1-202ENST00000563366 KLHL7Q8IXQ5 586 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms