RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TEKT4Q8WW24 435 aa18.84■□□□□ 0.61
COMMD4-208ENST00000563220 GDAP1L1Q96MZ0 367 aa18.84■□□□□ 0.61
COMMD4-208ENST00000563220 PGLYRP2Q96PD5 576 aa18.84■□□□□ 0.61
COMMD4-208ENST00000563220 ERP44Q9BS26 406 aa18.84■□□□□ 0.61
COMMD4-208ENST00000563220 SNRNP25Q9BV90 132 aaKnown RBP18.84■□□□□ 0.61
COMMD4-208ENST00000563220 FUT8Q9BYC5 575 aa18.84■□□□□ 0.61
COMMD4-208ENST00000563220 RC3H2Q9HBD1 1191 aaKnown RBP18.84■□□□□ 0.61
COMMD4-208ENST00000563220 UTP11Q9Y3A2 253 aaKnown RBP18.84■□□□□ 0.61
COMMD4-208ENST00000563220 COL4A6Q14031 1691 aa18.83■□□□□ 0.61
COMMD4-208ENST00000563220 DAPK3O43293 454 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 LTFP02788 710 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 IL4RP24394 825 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 FAM193AP78312 1265 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 MAP9Q49MG5 647 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 DUPD1Q68J44 220 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 ATAD1Q8NBU5 361 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 FUBP3Q96I24 572 aaKnown RBP eCLIP18.83■□□□□ 0.6
COMMD4-208ENST00000563220 RUNDC3BQ96NL0 473 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 TTPALQ9BTX7 342 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 VN1R3Q9BXE9 311 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 MAGEB5Q9BZ81 275 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 TRIM31Q9BZY9 425 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 MCOLN1Q9GZU1 580 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 PRDM10Q9NQV6 1147 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 VWA8A3KMH1 1905 aa18.83■□□□□ 0.6
COMMD4-208ENST00000563220 MDM4O15151 490 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 ECHS1P30084 290 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 SLC5A3P53794 718 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 ARPP19P56211 112 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 DPYSL3Q14195 570 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 ERMARDQ5T6L9 678 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 SCN4BQ8IWT1 228 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 SCML4Q8N228 414 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 CCDC185Q8N715 623 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 IGSF21Q96ID5 467 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 CALN1Q9BXU9 219 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 DPH5Q9H2P9 285 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 HOMER3Q9NSC5 361 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 PCDHB5Q9Y5E4 795 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 CST8O60676 142 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 GPR15P49685 360 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 DYNLT1P63172 113 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 DDR2Q16832 855 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 SDHAF4Q5VUM1 108 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 PRSS55Q6UWB4 352 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-208ENST00000563220 BBS12Q6ZW61 710 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 C16orf59Q7L2K0 433 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 OTOP2Q7RTS6 562 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 FAM131BQ86XD5 332 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 TTC9BQ8N6N2 239 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 ATL2Q8NHH9 583 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 IRGQQ8WZA9 623 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 SLCO2A1Q92959 643 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 HAUS1Q96CS2 278 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 RAB17Q9H0T7 212 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 PCDH18Q9HCL0 1135 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 SAE1Q9UBE0 346 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-208ENST00000563220 STAP1Q9ULZ2 295 aa18.82■□□□□ 0.6
COMMD4-208ENST00000563220 NLRC5Q86WI3 1866 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 SYNJ2BP-COX16A0A087WUM0 186 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 M0QYT0 321 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 CAPN9O14815 690 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 ECEL1O95672 775 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 FAM153BP0C7A2 387 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 NCAM1P13591 858 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 PDK2Q15119 407 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 FAM153CQ494X1 144 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 BSPRYQ5W0U4 402 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 KCNT2Q6UVM3 1135 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 ANKS3Q6ZW76 656 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 RFX6Q8HWS3 928 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 RNF168Q8IYW5 571 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-208ENST00000563220 EDEM1Q92611 657 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 NEUROG2Q9H2A3 272 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 IL23AQ9NPF7 189 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 COX16Q9P0S2 106 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 FAM153AQ9UHL3 310 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 RASAL2Q9UJF2 1139 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 DNPEPQ9ULA0 475 aa18.81■□□□□ 0.6
COMMD4-208ENST00000563220 H7C4K7 107 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 LIASO43766 372 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 EFCAB14O75071 495 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 VNN2O95498 520 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 EPHB4P54760 987 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 IFRD2Q12894 506 aaPredicted RBP18.8■□□□□ 0.6
COMMD4-208ENST00000563220 GPR17Q13304 367 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 CUL1Q13616 776 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 KRT81Q14533 505 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 SPOUT1Q5T280 376 aaKnown RBP18.8■□□□□ 0.6
COMMD4-208ENST00000563220 VSTM1Q6UX27 236 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 RNF19BQ6ZMZ0 732 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 STKLD1Q8NE28 680 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 SLC7A14Q8TBB6 771 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 ADAM32Q8TC27 787 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 FAM71BQ8TC56 605 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 PIGVQ9NUD9 493 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 MTMR10Q9NXD2 777 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 SNX24Q9Y343 169 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 MTMR11A4FU01 709 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 MAP2K7O14733 419 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms