RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TPSB2P20231 275 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 CNTFP26441 200 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 ABL2P42684 1182 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 PHKA2P46019 1235 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 RAP1GDS1P52306 607 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 TPSAB1Q15661 275 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 CCDC6Q16204 474 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 HSDL1Q3SXM5 330 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 KHDC1Q4VXA5 237 aaKnown RBP13.59□□□□□ -0.23
USB1-207ENST00000563149 C1orf228Q6PIY5 440 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 FAM183BPQ6ZVS7 135 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 PRPF39Q86UA1 669 aaKnown RBP13.59□□□□□ -0.23
USB1-207ENST00000563149 CAND1Q86VP6 1230 aaKnown RBP13.59□□□□□ -0.23
USB1-207ENST00000563149 NCAPG2Q86XI2 1143 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 TMPRSS6Q8IU80 811 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 CTAGE3PQ8IX95 158 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 TMEM192Q8IY95 271 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 MICAL1Q8TDZ2 1067 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 CFAP36Q96G28 342 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 HPDLQ96IR7 371 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 GCOM2Q9BZD3 368 aaPredicted RBP13.59□□□□□ -0.23
USB1-207ENST00000563149 PDGFDQ9GZP0 370 aaPredicted RBP13.59□□□□□ -0.23
USB1-207ENST00000563149 WWP1Q9H0M0 922 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 SIRPGQ9P1W8 387 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 ZFATQ9P243 1243 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 HMGXB4Q9UGU5 601 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 MGAMO43451 1857 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 RFPL1O75677 317 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 ARIH2O95376 493 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 PAX7P23759 505 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 IL4RP24394 825 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 RBL1P28749 1068 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 MAGEA3P43357 314 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 RBP5P82980 135 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 LBRQ14739 615 aaKnown RBP13.58□□□□□ -0.23
USB1-207ENST00000563149 CCDC14Q49A88 953 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 STXBP5Q5T5C0 1151 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 TRNP1Q6NT89 227 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 TIFABQ6ZNK6 161 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 RINLQ6ZS11 566 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 ZDHHC17Q8IUH5 632 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 DHX37Q8IY37 1157 aaKnown RBP13.58□□□□□ -0.23
USB1-207ENST00000563149 UBA3Q8TBC4 463 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 CCDC110Q8TBZ0 833 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 SPDL1Q96EA4 605 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 ZNF333Q96JL9 665 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 SIKE1Q9BRV8 207 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 NT5C1AQ9BXI3 368 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 PCDH18Q9HCL0 1135 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 TSPAN16Q9UKR8 245 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 FZD1Q9UP38 647 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 C2CD2Q9Y426 696 aa13.58□□□□□ -0.23
USB1-207ENST00000563149 SLC15A5A6NIM6 579 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 FAM159BA6NKW6 160 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 E5RJQ4 531 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 F8W8V4 182 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 H0Y3Z8 333 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 NVLO15381 856 aaKnown RBP13.58□□□□□ -0.24
USB1-207ENST00000563149 GCATO75600 419 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 PSMG1O95456 288 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 CRHR1P34998 444 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 NDST1P52848 882 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 OCRLQ01968 901 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 SLC34A1Q06495 639 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 ORC1Q13415 861 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 TMEM132DQ14C87 1099 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 C15orf59Q2T9L4 293 aaPredicted RBP13.58□□□□□ -0.24
USB1-207ENST00000563149 MUM1Q2TAK8 710 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 ZNF484Q5JVG2 852 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 SH3PXD2AQ5TCZ1 1133 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 ANO7Q6IWH7 933 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 RFWD3Q6PCD5 774 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 DSTYKQ6XUX3 929 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 ARCQ7LC44 396 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 PQLC3Q8N755 202 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 SMC1BQ8NDV3 1235 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 GSDMBQ8TAX9 411 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 SPATA33Q96N06 139 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 OSBPL1AQ9BXW6 950 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 FBXO6Q9NRD1 293 aaPredicted RBP13.58□□□□□ -0.24
USB1-207ENST00000563149 STX18Q9P2W9 335 aaKnown RBP13.58□□□□□ -0.24
USB1-207ENST00000563149 ZNF212Q9UDV6 495 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
USB1-207ENST00000563149 CAPN14A8MX76 684 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 SOCS7O14512 581 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 AVILO75366 819 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 SDC4P31431 198 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 NR2C2P49116 596 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 NRLP54845 237 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 TMPRSS15P98073 1019 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 SLC6A3Q01959 620 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 MTM1Q13496 603 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 ACSBG2Q5FVE4 666 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 TREML2Q5T2D2 321 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 MAP1SQ66K74 1059 aaPredicted RBP13.57□□□□□ -0.24
USB1-207ENST00000563149 IRGCQ6NXR0 463 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 CDHR3Q6ZTQ4 885 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 APBB1IPQ7Z5R6 666 aaPredicted RBP13.57□□□□□ -0.24
USB1-207ENST00000563149 CDR2LQ86X02 465 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms