RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TMEM209Q96SK2 561 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 CENPHQ9H3R5 247 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 TMBIM4Q9HC24 238 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 TMLHEQ9NVH6 421 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 NRP1O14786 923 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 MDM4O15151 490 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 CAPN15O75808 1086 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 IFNB1P01574 187 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 MYZAPP0CAP1 466 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 SELPP16109 830 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 LIG3P49916 1009 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 CAV1Q03135 178 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 GPS1Q13098 491 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 SLC25A52Q3SY17 297 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 DCAF6Q58WW2 860 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 ANKRD20A8PQ5CZ79 823 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 ERMARDQ5T6L9 678 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 OTUD1Q5VV17 481 aaPredicted RBP9.81□□□□□ -0.84
LINC00838-201ENST00000562956 DENND2CQ68D51 928 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 HIBCHQ6NVY1 386 aaPredicted RBP9.81□□□□□ -0.84
LINC00838-201ENST00000562956 DCLRE1AQ6PJP8 1040 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 LRRC31Q6UY01 552 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 CTU1Q7Z7A3 348 aaKnown RBP9.81□□□□□ -0.84
LINC00838-201ENST00000562956 METTL23Q86XA0 190 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 MAP7D3Q8IWC1 876 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 FAM126BQ8IXS8 530 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 CCDC185Q8N715 623 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 PQLC3Q8N755 202 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 OR10T2Q8NGX3 314 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 FAM76AQ8TAV0 307 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 SPATA18Q8TC71 538 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 MYLPFQ96A32 169 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 ACBD6Q9BR61 282 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 ULBP1Q9BZM6 244 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 SAGE1Q9NXZ1 904 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 HHLA1C9JL84 531 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 RIPK2O43353 540 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 NUDT17P0C025 328 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 L1CAMP32004 1257 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 EIF3EP60228 445 aaKnown RBP9.8□□□□□ -0.84
LINC00838-201ENST00000562956 MTFR1Q15390 333 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 DNAJC21Q5F1R6 531 aaKnown RBP9.8□□□□□ -0.84
LINC00838-201ENST00000562956 PPP6R3Q5H9R7 873 aaPredicted RBP9.8□□□□□ -0.84
LINC00838-201ENST00000562956 INTS6LQ5JSJ4 861 aaKnown RBP9.8□□□□□ -0.84
LINC00838-201ENST00000562956 SYPL2Q5VXT5 272 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 FAM171BQ6P995 826 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 C1orf228Q6PIY5 440 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 LRRTM3Q86VH5 581 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 UNC45BQ8IWX7 931 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 PCDH19Q8TAB3 1148 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 UHMK1Q8TAS1 419 aaKnown RBP9.8□□□□□ -0.84
LINC00838-201ENST00000562956 CCHCR1Q8TD31 782 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 SUSD3Q96L08 255 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 ATP6V1G3Q96LB4 118 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 PKMYT1Q99640 499 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 FRMD8P1Q9BZ68 369 aaPredicted RBP9.8□□□□□ -0.84
LINC00838-201ENST00000562956 GOLGA6L10A6NI86 522 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 YJEFN3A6XGL0 299 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 E7ENQ6 273 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 DNM1LO00429 736 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 DAB1O75553 588 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 SULT1E1P49888 294 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 NRLP54845 237 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 DSC1Q08554 894 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 IFFO1Q0D2I5 559 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 NOMO2Q5JPE7 1267 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 RAB41Q5JT25 222 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 OVOS1Q6IE37 1185 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 ZC3H18Q86VM9 953 aaKnown RBP9.8□□□□□ -0.84
LINC00838-201ENST00000562956 FAM131BQ86XD5 332 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 PLD5Q8N7P1 536 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 BBOF1Q8ND07 529 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 NT5C3BQ969T7 300 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 SMARCD1Q96GM5 515 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 CDC42EP4Q9H3Q1 356 aaKnown RBP9.8□□□□□ -0.84
LINC00838-201ENST00000562956 DHX35Q9H5Z1 703 aaKnown RBP9.8□□□□□ -0.84
LINC00838-201ENST00000562956 PCDH9Q9HC56 1237 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 MTMR10Q9NXD2 777 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 DSEQ9UL01 958 aa9.8□□□□□ -0.84
LINC00838-201ENST00000562956 SYNJ2BP-COX16A0A087WUM0 186 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 DNALI1O14645 258 aaPredicted RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 FYNP06241 537 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 USP17L7P0C7H9 530 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 BDNFP23560 247 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 TFDP2Q14188 446 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 DPYSL2Q16555 572 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 FAM182AQ5T1J6 154 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 STRADAQ7RTN6 431 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 COLGALT2Q8IYK4 626 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 PYROXD2Q8N2H3 581 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 FAM71DQ8N9W8 422 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 DBF4BQ8NFT6 615 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 PPM1EQ8WY54 764 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 P3H4Q92791 437 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 DEFB118Q96PH6 123 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 SLC2A13Q96QE2 648 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 POPDC2Q9HBU9 364 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 CSNK1G1Q9HCP0 422 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 TMPRSS4Q9NRS4 437 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms