RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 RALGAPA1Q6GYQ0 2036 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.44■□□□□ 0.38
CDT1-202ENST00000562747 SPECC1L-ADORA2AF8WAN1 911 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 PES1O00541 588 aaKnown RBP17.44■□□□□ 0.38
CDT1-202ENST00000562747 XPO1O14980 1071 aaKnown RBP17.44■□□□□ 0.38
CDT1-202ENST00000562747 GDF9O60383 454 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 PAPSS2O95340 614 aaPredicted RBP17.44■□□□□ 0.38
CDT1-202ENST00000562747 TPM2P07951 284 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 SETSIPP0DME0 302 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 CTHP32929 405 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 KPNA1P52294 538 aaPredicted RBP17.44■□□□□ 0.38
CDT1-202ENST00000562747 MLLT6P55198 1093 aaPredicted RBP17.44■□□□□ 0.38
CDT1-202ENST00000562747 USP4Q13107 963 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 ZNF77Q15935 545 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 CNGA2Q16280 664 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 HECTD3Q5T447 861 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 LCLAT1Q6UWP7 414 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 CCDC186Q7Z3E2 898 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 PIGZQ86VD9 579 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 NETO1Q8TDF5 533 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 BPIFA3Q9BQP9 254 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 RNF38Q9H0F5 515 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 SEMA4GQ9NTN9 838 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 HELZP42694 1942 aaKnown RBP17.44■□□□□ 0.38
CDT1-202ENST00000562747 MYO16Q9Y6X6 1858 aa17.44■□□□□ 0.38
CDT1-202ENST00000562747 MAP1BP46821 2468 aaKnown RBP17.43■□□□□ 0.38
CDT1-202ENST00000562747 SLC30A4O14863 429 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 ADRB1P08588 477 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 KRT5P13647 590 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 PLA2G4AP47712 749 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 PSEN1P49768 467 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 TNK2Q07912 1038 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 PDE4CQ08493 712 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 LRRC32Q14392 662 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 MTF1Q14872 753 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 PON2Q15165 354 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 KRT31Q15323 416 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 ANO6Q4KMQ2 910 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 PKDCCQ504Y2 493 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 PPM1JQ5JR12 505 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 RAB41Q5JT25 222 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 CC2D1AQ6P1N0 951 aaPredicted RBP17.43■□□□□ 0.38
CDT1-202ENST00000562747 GJB7Q6PEY0 223 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 PRR23CQ6ZRP0 262 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 KIAA1958Q8N8K9 716 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 ANKRD20A12PQ8NF67 263 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 RIN3Q8TB24 985 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 SH3RF2Q8TEC5 729 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 TFAP2BQ92481 460 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 MSANTD3Q96H12 275 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 FAM83CQ9BQN1 747 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 C8orf33Q9H7E9 229 aaPredicted RBP17.43■□□□□ 0.38
CDT1-202ENST00000562747 SIX2Q9NPC8 291 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 TAB2Q9NYJ8 693 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.43■□□□□ 0.38
CDT1-202ENST00000562747 CHD8Q9HCK8 2581 aa17.43■□□□□ 0.38
CDT1-202ENST00000562747 CYP26A1O43174 497 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 LRP3O75074 770 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 BRD2P25440 801 aaKnown RBP17.42■□□□□ 0.38
CDT1-202ENST00000562747 APBA1Q02410 837 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 KCNMA1Q12791 1236 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 NCAPHQ15003 741 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 ARHGAP44Q17R89 818 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 PKN3Q6P5Z2 889 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 C1orf228Q6PIY5 440 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.42■□□□□ 0.38
CDT1-202ENST00000562747 LONP2Q86WA8 852 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 DDX42Q86XP3 938 aaKnown RBP eCLIP17.42■□□□□ 0.38
CDT1-202ENST00000562747 SHC3Q92529 594 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 ZSWIM1Q9BR11 485 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 VPS16Q9H269 839 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 CYLDQ9NQC7 956 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 GKN1Q9NS71 199 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 DNAJC12Q9UKB3 198 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 CPQQ9Y646 472 aa17.42■□□□□ 0.38
CDT1-202ENST00000562747 EML5Q05BV3 1969 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 LEFTY2O00292 366 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 COCHO43405 550 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 MBL2P11226 248 aaPredicted RBP17.41■□□□□ 0.38
CDT1-202ENST00000562747 ZNF18P17022 549 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 ZXDBP98169 803 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 CCINQ13939 588 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 PDGFRLQ15198 375 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 CSRP2Q16527 193 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 MEA1Q16626 185 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 SKOR2Q2VWA4 1001 aaPredicted RBP17.41■□□□□ 0.38
CDT1-202ENST00000562747 RALGPS2Q86X27 583 aaPredicted RBP17.41■□□□□ 0.38
CDT1-202ENST00000562747 ZNF276Q8N554 614 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 FAM160A2Q8N612 972 aaPredicted RBP17.41■□□□□ 0.38
CDT1-202ENST00000562747 AOPEPQ8N6M6 819 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 UBA3Q8TBC4 463 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 OSCP1Q8WVF1 389 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 KCTD13Q8WZ19 329 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 FUCA2Q9BTY2 467 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 CCSER2Q9H7U1 834 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 LRRC4Q9HBW1 653 aa17.41■□□□□ 0.38
CDT1-202ENST00000562747 LIMA1Q9UHB6 759 aaKnown RBP17.41■□□□□ 0.38
CDT1-202ENST00000562747 USP24Q9UPU5 2620 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 A0A1W2PQH9 124 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 LRRC10BA6NIK2 292 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms