RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 BBS2Q9BXC9 721 aa19.54■□□□□ 0.72
KATNB1-202ENST00000562542 TBC1D7Q9P0N9 293 aa19.54■□□□□ 0.72
KATNB1-202ENST00000562542 CHORDC1Q9UHD1 332 aaPredicted RBP19.54■□□□□ 0.72
KATNB1-202ENST00000562542 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.54■□□□□ 0.72
KATNB1-202ENST00000562542 NFE2L3Q9Y4A8 694 aa19.54■□□□□ 0.72
KATNB1-202ENST00000562542 PRRT4C9JH25 899 aa19.53■□□□□ 0.72
KATNB1-202ENST00000562542 RTN3O95197 1032 aaPredicted RBP19.53■□□□□ 0.72
KATNB1-202ENST00000562542 GCNT3O95395 438 aa19.53■□□□□ 0.72
KATNB1-202ENST00000562542 PLA2G2AP14555 144 aa19.53■□□□□ 0.72
KATNB1-202ENST00000562542 TYRP14679 529 aa19.53■□□□□ 0.72
KATNB1-202ENST00000562542 GNL1P36915 607 aaPredicted RBP19.53■□□□□ 0.72
KATNB1-202ENST00000562542 SUZ12Q15022 739 aaKnown RBP19.53■□□□□ 0.72
KATNB1-202ENST00000562542 L1TD1Q5T7N2 865 aaKnown RBP19.53■□□□□ 0.72
KATNB1-202ENST00000562542 DCAF12L1Q5VU92 463 aa19.53■□□□□ 0.72
KATNB1-202ENST00000562542 OR6B3Q8NGW1 331 aa19.53■□□□□ 0.72
KATNB1-202ENST00000562542 ZSCAN31Q96LW9 406 aaPredicted RBP19.53■□□□□ 0.72
KATNB1-202ENST00000562542 ZNF518BQ9C0D4 1074 aa19.53■□□□□ 0.72
KATNB1-202ENST00000562542 PCIF1Q9H4Z3 704 aa19.53■□□□□ 0.72
KATNB1-202ENST00000562542 CCSER2Q9H7U1 834 aa19.53■□□□□ 0.72
KATNB1-202ENST00000562542 WSB2Q9NYS7 404 aaPredicted RBP19.53■□□□□ 0.72
KATNB1-202ENST00000562542 WASH3PC4AMC7 463 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 ATXN7O15265 892 aaPredicted RBP19.52■□□□□ 0.72
KATNB1-202ENST00000562542 CACNG3O60359 315 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 PPP1R37O75864 691 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 DKK1O94907 266 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 GARTP22102 1010 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 CAMK2BQ13554 666 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 TPGS1Q6ZTW0 290 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 LIMS2Q7Z4I7 341 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 CADM4Q8NFZ8 388 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 OVCA2Q8WZ82 227 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 WBP2Q969T9 261 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 MRPL45Q9BRJ2 306 aaKnown RBP19.52■□□□□ 0.72
KATNB1-202ENST00000562542 TMEM30AQ9NV96 361 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 INTS13Q9NVM9 706 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 PCDHGB2Q9Y5G2 931 aa19.52■□□□□ 0.72
KATNB1-202ENST00000562542 A0A1B0GVT2 93 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 GFRA2O00451 464 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 CLDN5O00501 218 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 TNFSF14O43557 240 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 HLA-EP13747 358 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 PTPN1P18031 435 aaKnown RBP19.51■□□□□ 0.71
KATNB1-202ENST00000562542 ITPKBP27987 946 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 DGKGP49619 791 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 BNC1Q01954 994 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 FUT11Q495W5 492 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 LRRC69Q6ZNQ3 347 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 ENGASEQ8NFI3 743 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 OR5B17Q8NGF7 314 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 SNX19Q92543 992 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 CBWD1Q9BRT8 395 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 USP36Q9P275 1121 aaKnown RBP19.51■□□□□ 0.71
KATNB1-202ENST00000562542 WDR35Q9P2L0 1181 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 SEL1LQ9UBV2 794 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 EIF2B4Q9UI10 523 aaKnown RBP19.51■□□□□ 0.71
KATNB1-202ENST00000562542 BTBD3Q9Y2F9 522 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 MAST4O15021 2626 aa19.51■□□□□ 0.71
KATNB1-202ENST00000562542 PRPF6O94906 941 aaKnown RBP19.5■□□□□ 0.71
KATNB1-202ENST00000562542 DUOXA2Q1HG44 320 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 DHRS13Q6UX07 377 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 SCAMP5Q8TAC9 235 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 BHMTQ93088 406 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 DUSP9Q99956 384 aaKnown RBP19.5■□□□□ 0.71
KATNB1-202ENST00000562542 STRA6Q9BX79 667 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 DPEP3Q9H4B8 488 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 GMIPQ9P107 970 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 KIF3AQ9Y496 699 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 STON1Q9Y6Q2 735 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 PTPRJQ12913 1337 aa19.5■□□□□ 0.71
KATNB1-202ENST00000562542 GOLGA4Q13439 2230 aaKnown RBP19.49■□□□□ 0.71
KATNB1-202ENST00000562542 METTL12A8MUP2 240 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 PLK4O00444 970 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 OXTRP30559 389 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 CSNK1EP49674 416 aaKnown RBP19.49■□□□□ 0.71
KATNB1-202ENST00000562542 TUBP50607 506 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 TPMTP51580 245 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 SMAD1Q15797 465 aaKnown RBP19.49■□□□□ 0.71
KATNB1-202ENST00000562542 DBX2Q6ZNG2 339 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 METTL3Q86U44 580 aaKnown RBP19.49■□□□□ 0.71
KATNB1-202ENST00000562542 GPD1LQ8N335 351 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 NXPE2Q96DL1 559 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 B3GNT5Q9BYG0 378 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 ITM2CQ9NQX7 267 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.49■□□□□ 0.71
KATNB1-202ENST00000562542 LSM7Q9UK45 103 aaKnown RBP19.49■□□□□ 0.71
KATNB1-202ENST00000562542 PCDHB13Q9Y5F0 798 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 RAI2Q9Y5P3 530 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 SHROOM3Q8TF72 1996 aa19.49■□□□□ 0.71
KATNB1-202ENST00000562542 A8MXQ7 604 aa19.48■□□□□ 0.71
KATNB1-202ENST00000562542 KCNJ18B7U540 433 aa19.48■□□□□ 0.71
KATNB1-202ENST00000562542 E9PAM4 449 aa19.48■□□□□ 0.71
KATNB1-202ENST00000562542 CAPN9O14815 690 aa19.48■□□□□ 0.71
KATNB1-202ENST00000562542 SYNCRIPO60506 623 aaKnown RBP19.48■□□□□ 0.71
KATNB1-202ENST00000562542 ACADMP11310 421 aa19.48■□□□□ 0.71
KATNB1-202ENST00000562542 GAP43P17677 238 aa19.48■□□□□ 0.71
KATNB1-202ENST00000562542 LONP1P36776 959 aaKnown RBP19.48■□□□□ 0.71
KATNB1-202ENST00000562542 GRK6P43250 576 aa19.48■□□□□ 0.71
KATNB1-202ENST00000562542 AFF3P51826 1226 aaKnown RBP19.48■□□□□ 0.71
KATNB1-202ENST00000562542 SLC5A3P53794 718 aa19.48■□□□□ 0.71
KATNB1-202ENST00000562542 TNNC1P63316 161 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms