RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 TMEFF1Q8IYR6 380 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TERB1Q8NA31 727 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SPRYD3Q8NCJ5 442 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PIGKQ92643 395 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SPACA7Q96KW9 195 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 KLF16Q9BXK1 252 aaPredicted RBP17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 FBXO44Q9H4M3 255 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 OSER1Q9NX31 292 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 DEC1Q9P2X7 70 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CIZ1Q9ULV3 898 aaPredicted RBP17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HPSEQ9Y251 543 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ZZEF1O43149 2961 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SPEGQ15772 3267 aa17.64■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HHLA1C9JL84 531 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CYP26A1O43174 497 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CMA1P23946 247 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NOVA1P51513 510 aaKnown RBP17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 IRX4P78413 519 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 INCA1Q0VD86 236 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 HTR3DQ70Z44 454 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ARMCX6Q7L4S7 300 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 LPCAT2Q7L5N7 544 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MIB1Q86YT6 1006 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ZNF513Q8N8E2 541 aaPredicted RBP17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 KCNV2Q8TDN2 545 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NMUR1Q9HB89 426 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 APOBEC3GQ9HC16 384 aaKnown RBP17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TMEM9BQ9NQ34 198 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CYLDQ9NQC7 956 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TLR8Q9NR97 1041 aaKnown RBP17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TMEM74BQ9NUR3 256 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TRAF3IP3Q9Y228 551 aa17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CNOT1A5YKK6 2376 aaKnown RBP17.64■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MYL1P05976 194 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PRR29P0C7W0 189 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 FAM200BP0CF97 657 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TRIM49P0CI25 452 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TRIM49CP0CI26 452 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 VAMP7P51809 220 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 C10orf76Q5T2E6 689 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 DAB2IPQ5VWQ8 1189 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 JAKMIP2Q96AA8 810 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 HNRNPABQ99729 332 aaKnown RBP17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 EVLQ9UI08 416 aaPredicted RBP17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 SCML2Q9UQR0 700 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 FRMD4BQ9Y2L6 1034 aa17.63■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MYH10P35580 1976 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MAPK13O15264 365 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MAP3K13O43283 966 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CALUO43852 315 aaPredicted RBP17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 GABRG2P18507 467 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PPP3CAQ08209 521 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PREPLQ4J6C6 727 aaPredicted RBP17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TRIM61Q5EBN2 209 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 SH3PXD2AQ5TCZ1 1133 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PGBD3Q8N328 593 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TAS1R2Q8TE23 839 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CYFIP2Q96F07 1278 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 DNAJC17Q9NVM6 304 aaKnown RBP17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 USP25Q9UHP3 1055 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NUDT5Q9UKK9 219 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 STARD13Q9Y3M8 1113 aa17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ATXN2Q99700 1313 aaKnown RBP17.62■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 A0A1W2PQF6 199 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 A0A1W2PQH9 124 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NEDD8-MDP1E9PL57 170 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MDM4O15151 490 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CACNG3O60359 315 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 RHOBTB3O94955 611 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 HOXB2P14652 356 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TYRP14679 529 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ACO1P21399 889 aaKnown RBP17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NR2F2P24468 414 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ATP5C1P36542 298 aaKnown RBP17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 WASP42768 502 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 GCLMP48507 274 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NDUFA8P51970 172 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ZNF252P-AS1Q0IIN9 211 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NFIL3Q16649 462 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 EGFLAMQ63HQ2 1017 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 GRAMD4Q6IC98 578 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TRMT11Q7Z4G4 463 aaKnown RBP17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 SYT12Q8IV01 421 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 P2RY11Q96G91 374 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ACOX2Q99424 681 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 BBS2Q9BXC9 721 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CD248Q9HCU0 757 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MARK1Q9P0L2 795 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CALCOCO1Q9P1Z2 691 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MAPK8IP1Q9UQF2 711 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PCDHA5Q9Y5H7 936 aa17.61■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CEP295Q9C0D2 2601 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 FAM237AA0A1B0GTK4 181 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PRRT4C9JH25 899 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CILPO75339 1184 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 RARGP13631 454 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CD58P19256 250 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ITPKAP23677 461 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NTSR1P30989 418 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms