RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 PPP6R3Q5H9R7 873 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 C1orf185Q5T7R7 199 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 ANXA8L1Q5VT79 327 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 NCAPH2Q6IBW4 605 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 BORAQ6PGQ7 559 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 RFX8Q6ZV50 586 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 PTCHD4Q6ZW05 846 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 PIWIL3Q7Z3Z3 882 aaKnown RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 PLA2G4DQ86XP0 818 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 KRTAP1-3Q8IUG1 177 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 CLEC10AQ8IUN9 316 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 ZNF321PQ8N8H1 164 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 FBXO18Q8NFZ0 1043 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 LINS1Q8NG48 757 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 OR8K1Q8NGG5 319 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 ASAP3Q8TDY4 903 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 PMEPA1Q969W9 287 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 KIAA1191Q96A73 305 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 SGF29Q96ES7 293 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 ADAD1Q96M93 576 aaKnown RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 FAM20AQ96MK3 541 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 PPP1R10Q96QC0 940 aaKnown RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 PRPF18Q99633 342 aaKnown RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 FAM83CQ9BQN1 747 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 C9orf16Q9BUW7 83 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 TRIM62Q9BVG3 475 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 TMEM120AQ9BXJ8 343 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 RNF208Q9H0X6 261 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 TFB2MQ9H5Q4 396 aaKnown RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 AZI2Q9H6S1 392 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 LRRC19Q9H756 370 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 JMJD4Q9H9V9 463 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 C8orf4Q9NR00 106 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 DDX19AQ9NUU7 478 aaKnown RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 BABAM1Q9NWV8 329 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 RTEL1Q9NZ71 1219 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 IL37Q9NZH6 218 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 COQ3Q9NZJ6 369 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 UBA2Q9UBT2 640 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 REV1Q9UBZ9 1251 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 MBD1Q9UIS9 605 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 TELO2Q9Y4R8 837 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 PCDHB6Q9Y5E3 794 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 PCDHGB6Q9Y5F9 930 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 PCDHGA2Q9Y5H1 932 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 TRPV2Q9Y5S1 764 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 BZW2Q9Y6E2 419 aaKnown RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 OAS3Q9Y6K5 1087 aaKnown RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 FLT4P35916 1363 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-211ENST00000562199 NWD1Q149M9 1564 aa5.76□□□□□ -1.49
CAPN3-211ENST00000562199 IGSF1Q8N6C5 1336 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 PRR36Q9H6K5 1346 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 SLIT1O75093 1534 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 PI4KAP2A4QPH2 592 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 HSBP1L1C9JCN9 74 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 SYNCRIPO60506 623 aaKnown RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 GREM1O60565 184 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 LRRN2O75325 713 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 IDH1O75874 414 aaKnown RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 RNF8O76064 485 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 TMCC1O94876 653 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 PENKP01210 267 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 URODP06132 367 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 UBTFL1P0CB47 393 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 ZBTB48P10074 688 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 MYBP10242 640 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 CTRB1P17538 263 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 DDX5P17844 614 aaKnown RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 KCNA5P22460 613 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 RXRBP28702 533 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 EIF4A3P38919 411 aaKnown RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 HTR2BP41595 481 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 STAT5AP42229 794 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 ACAA2P42765 397 aaKnown RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 DHPSP49366 369 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 IRAK1P51617 712 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 ZNF75DP51815 510 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 CASP5P51878 434 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 GP2P55259 537 aaKnown RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 ARL4CP56559 192 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 KRT17Q04695 432 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 ST3GAL1Q11201 340 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 GRB10Q13322 594 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 RIPK1Q13546 671 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 HABP2Q14520 560 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 RFTN1Q14699 578 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 PCBP2Q15366 365 aaKnown RBP eCLIP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 TAF5Q15542 800 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 TRADDQ15628 312 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 FNDC3BQ53EP0 1204 aaKnown RBP5.75□□□□□ -1.49
CAPN3-211ENST00000562199 SNX30Q5VWJ9 437 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 ANKRD34AQ69YU3 496 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 CTRB2Q6GPI1 263 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 PKN3Q6P5Z2 889 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 DCLRE1AQ6PJP8 1040 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 TPTE2Q6XPS3 522 aa5.75□□□□□ -1.49
CAPN3-211ENST00000562199 R3HCC1LQ7Z5L2 792 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms