RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SHISA7A6NL88 538 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 CHADO15335 359 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 SART1O43290 800 aaKnown RBP14.08□□□□□ -0.16
CDH1-204ENST00000562118 IGLV3-25P01717 112 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 ERBB2P04626 1255 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 GLI1P08151 1106 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 CCDC172P0C7W6 258 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 RARGP13631 454 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 ALADP13716 330 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 MMP8P22894 467 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 IFRD2Q12894 506 aaPredicted RBP14.08□□□□□ -0.16
CDH1-204ENST00000562118 HFE2Q6ZVN8 426 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 ARCQ7LC44 396 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 DDX42Q86XP3 938 aaKnown RBP eCLIP14.08□□□□□ -0.16
CDH1-204ENST00000562118 ZDHHC17Q8IUH5 632 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 PASD1Q8IV76 773 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 BPIFB1Q8TDL5 484 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 ASIC4Q96FT7 647 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 MRFAP1L1Q96HT8 127 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 PPP1R13BQ96KQ4 1090 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 DNAJC7Q99615 494 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 SMG9Q9H0W8 520 aaKnown RBP14.08□□□□□ -0.16
CDH1-204ENST00000562118 SMOC2Q9H3U7 446 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 ABCC13Q9NSE7 274 aa14.08□□□□□ -0.16
CDH1-204ENST00000562118 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.08□□□□□ -0.16
CDH1-204ENST00000562118 LEFTY2O00292 366 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 NARSO43776 548 aaKnown RBP14.07□□□□□ -0.16
CDH1-204ENST00000562118 IGLV3-27P01718 113 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 LTFP02788 710 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 CKMP06732 381 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 PLCB2Q00722 1185 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 SIGLEC14Q08ET2 396 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 NNTQ13423 1086 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 CLEC16AQ2KHT3 1053 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 ARHGAP29Q52LW3 1261 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 BSPRYQ5W0U4 402 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 SLC26A9Q7LBE3 791 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 TADA2BQ86TJ2 420 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 PHF13Q86YI8 300 aaPredicted RBP14.07□□□□□ -0.16
CDH1-204ENST00000562118 SCUBE3Q8IX30 993 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 DRC7Q8IY82 874 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 SLC30A5Q8TAD4 765 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 NDRG1Q92597 394 aaKnown RBP14.07□□□□□ -0.16
CDH1-204ENST00000562118 PIWIL1Q96J94 861 aaKnown RBP14.07□□□□□ -0.16
CDH1-204ENST00000562118 NOX5Q96PH1 765 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 SLC2A13Q96QE2 648 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 AGPAT1Q99943 283 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 DDX23Q9BUQ8 820 aaKnown RBP14.07□□□□□ -0.16
CDH1-204ENST00000562118 TRPC7Q9HCX4 862 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 OLA1Q9NTK5 396 aaKnown RBP14.07□□□□□ -0.16
CDH1-204ENST00000562118 WNT16Q9UBV4 365 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 DNMT3LQ9UJW3 386 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 NAGPAQ9UK23 515 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 NENFQ9UMX5 172 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 CEP83Q9Y592 693 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 CPQQ9Y646 472 aa14.07□□□□□ -0.16
CDH1-204ENST00000562118 KMT2EQ8IZD2 1858 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 TCRBV5S1A1TA0A578 114 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 E2F8A0AVK6 867 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 TBX18O95935 607 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 RALAP11233 206 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 LCP1P13796 627 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 ATP5C1P36542 298 aaKnown RBP14.06□□□□□ -0.16
CDH1-204ENST00000562118 GPC5P78333 572 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 MTF1Q14872 753 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 SFMBT2Q5VUG0 894 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 TAF3Q5VWG9 929 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 Q6ZNB5 142 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 FAM183BPQ6ZVS7 135 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 HTR3DQ70Z44 454 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 MON1BQ7L1V2 547 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 ZNF571Q7Z3V5 609 aaPredicted RBP14.06□□□□□ -0.16
CDH1-204ENST00000562118 BNIPLQ7Z465 357 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 XYLT1Q86Y38 959 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 SH3RF2Q8TEC5 729 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 OSCP1Q8WVF1 389 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 NT5C3BQ969T7 300 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 TRIM62Q9BVG3 475 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 TRMT61BQ9BVS5 477 aaKnown RBP14.06□□□□□ -0.16
CDH1-204ENST00000562118 C11orf16Q9NQ32 467 aa14.06□□□□□ -0.16
CDH1-204ENST00000562118 GZMAP12544 262 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 GLULP15104 373 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 CASP14P31944 242 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 SNX16P57768 344 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 PFKPQ01813 784 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 SLC6A3Q01959 620 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 TRIP4Q15650 581 aaPredicted RBP14.05□□□□□ -0.16
CDH1-204ENST00000562118 ASIC2Q16515 512 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 NAA35Q5VZE5 725 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 WDR59Q6PJI9 974 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 BMP8AQ7Z5Y6 402 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 FAM217AQ8IXS0 508 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 ZNF687Q8N1G0 1237 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 ST13P5Q8NFI4 369 aaPredicted RBP14.05□□□□□ -0.16
CDH1-204ENST00000562118 IRF7Q92985 503 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 C18orf8Q96DM3 657 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 CHFRQ96EP1 664 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 MIS12Q9H081 205 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 HAUS4Q9H6D7 363 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 POPDC2Q9HBU9 364 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms