RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 TXNRD3NBQ6F5E7 133 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 TWF2Q6IBS0 349 aaKnown RBP12.12□□□□□ -0.47
PCAT1-202ENST00000561978 ZDHHC17Q8IUH5 632 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 MYCBPAPQ8TBZ2 947 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 ZNF473Q8WTR7 871 aaKnown RBP12.12□□□□□ -0.47
PCAT1-202ENST00000561978 STK32AQ8WU08 396 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 MYCBPQ99417 103 aaPredicted RBP12.12□□□□□ -0.47
PCAT1-202ENST00000561978 FAM118BQ9BPY3 351 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 MAK16Q9BXY0 300 aaKnown RBP12.12□□□□□ -0.47
PCAT1-202ENST00000561978 RSAD1Q9HA92 442 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 CNTN3Q9P232 1028 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 HESX1Q9UBX0 185 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 USP18Q9UMW8 372 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 EFCAB14O75071 495 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 TRUB2O95900 331 aaKnown RBP12.12□□□□□ -0.47
PCAT1-202ENST00000561978 AMHP03971 560 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 ABHD2P08910 425 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 MIPP30301 263 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 PBX2P40425 430 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 KYNUQ16719 465 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 HABP4Q5JVS0 413 aaKnown RBP12.12□□□□□ -0.47
PCAT1-202ENST00000561978 OR6B2Q6IFH4 312 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 ALKAL1Q6UXT8 129 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 DPH6Q7L8W6 267 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 MAP7D3Q8IWC1 876 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 ARFGAP1Q8N6T3 406 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 SLC35B2Q8TB61 432 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 CFAP57Q96MR6 1250 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 TJP2Q9UDY2 1190 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 SNX9Q9Y5X1 595 aa12.12□□□□□ -0.47
PCAT1-202ENST00000561978 ATXN2Q99700 1313 aaKnown RBP12.11□□□□□ -0.47
PCAT1-202ENST00000561978 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.11□□□□□ -0.47
PCAT1-202ENST00000561978 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.11□□□□□ -0.47
PCAT1-202ENST00000561978 SMIM23A6NLE4 172 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 SGK1O00141 431 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 CST8O60676 142 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 PDGFRAP16234 1089 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 IL1R2P27930 398 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 PNPLA4P41247 253 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 MAGEA4P43358 317 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 GPS1Q13098 491 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 DSC3Q14574 896 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 LRIT3Q3SXY7 679 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 ERMARDQ5T6L9 678 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 HERC6Q8IVU3 1022 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 RIBC1Q8N443 379 aaPredicted RBP12.11□□□□□ -0.47
PCAT1-202ENST00000561978 EMC1Q8N766 993 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 RNF169Q8NCN4 708 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 UHMK1Q8TAS1 419 aaKnown RBP12.11□□□□□ -0.47
PCAT1-202ENST00000561978 EPS8L3Q8TE67 593 aaKnown RBP12.11□□□□□ -0.47
PCAT1-202ENST00000561978 TOP1MTQ969P6 601 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 ITFG2Q969R8 447 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 LRCH3Q96II8 777 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 RBM15Q96T37 977 aaKnown RBP eCLIP12.11□□□□□ -0.47
PCAT1-202ENST00000561978 SLC9A7Q96T83 725 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 ZBED2Q9BTP6 218 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 DDX23Q9BUQ8 820 aaKnown RBP12.11□□□□□ -0.47
PCAT1-202ENST00000561978 PBX4Q9BYU1 374 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 PHACTR1Q9C0D0 580 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 ADAM7Q9H2U9 754 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 RGS18Q9NS28 235 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 NINJ2Q9NZG7 142 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 VCANP13611 3396 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 RALGAPA2Q2PPJ7 1873 aa12.11□□□□□ -0.47
PCAT1-202ENST00000561978 C2CD4BA6NLJ0 364 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 APOC4-APOC2K7ER74 178 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 GJB5O95377 273 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 APOC2P02655 101 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 SEC24CP53992 1094 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 IFI35P80217 286 aaPredicted RBP12.1□□□□□ -0.47
PCAT1-202ENST00000561978 TFDP2Q14188 446 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 GOLGA7BQ2TAP0 167 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 BOLA3Q53S33 107 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 C9orf57Q5W0N0 161 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 ARHGAP17Q68EM7 881 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 SLC24A5Q71RS6 500 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 TMEM110Q86TL2 294 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 RXFP2Q8WXD0 754 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 RSAD2Q8WXG1 361 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 ZNF560Q96MR9 790 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 ZMAT2Q96NC0 199 aaKnown RBP12.1□□□□□ -0.47
PCAT1-202ENST00000561978 XPO6Q96QU8 1125 aaKnown RBP12.1□□□□□ -0.47
PCAT1-202ENST00000561978 SELENOSQ9BQE4 189 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 SLC4A5Q9BY07 1137 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 EIF2AQ9BY44 585 aaKnown RBP12.1□□□□□ -0.47
PCAT1-202ENST00000561978 RABEP2Q9H5N1 569 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 PPCSQ9HAB8 311 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 LRRC4CQ9HCJ2 640 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 INTS9Q9NV88 658 aaKnown RBP12.1□□□□□ -0.47
PCAT1-202ENST00000561978 PCSK1NQ9UHG2 260 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 SHOC2Q9UQ13 582 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 A0A087WUV0 522 aaPredicted RBP12.1□□□□□ -0.47
PCAT1-202ENST00000561978 C9IYK1 514 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 E5RJQ4 531 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 DPYSL4O14531 572 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 TLL1O43897 1013 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 PRPSAP2O60256 369 aa12.1□□□□□ -0.47
PCAT1-202ENST00000561978 CDH16O75309 829 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms