RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TEX44Q53QW1 395 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 SH3PXD2AQ5TCZ1 1133 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 HOMEZQ8IX15 550 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 GSTCDQ8NEC7 633 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 PEBP4Q96S96 227 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 APOL6Q9BWW8 343 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 MRPL4Q9BYD3 311 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 KLC2Q9H0B6 622 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 POPDC2Q9HBU9 364 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 SMYD2Q9NRG4 433 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 KLHL33A6NCF5 533 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 SPATA31C2B4DYI2 1134 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 PIK3R2O00459 728 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 TRDMT1O14717 391 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 ZBED1O96006 694 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 SERPINA6P08185 405 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 SRGAP2CP0DJJ0 459 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 CRABP2P29373 138 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 GSTT1P30711 240 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 FAM47CQ5HY64 1035 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 ZPBP2Q6X784 338 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 LRRN4Q8WUT4 740 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 GPAMQ9HCL2 828 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 SOX13Q9UN79 622 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 MAFBQ9Y5Q3 323 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 OGTO15294 1046 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 FKBP6O75344 327 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 APOEP02649 317 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 C1QAP02745 245 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 BPGMP07738 259 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 C6orf222P0C671 652 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 CSH1P0DML2 217 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 CSH2P0DML3 217 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 RBL1P28749 1068 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 SLC25A3Q00325 362 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 MAP3K10Q02779 954 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 TMEM132AQ24JP5 1023 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 RASSF3Q86WH2 238 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 WDR75Q8IWA0 830 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 PYDC1Q8WXC3 89 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 PPP2R3CQ969Q6 453 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 TRIM56Q9BRZ2 755 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 ZCWPW1Q9H0M4 648 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 PGAP2Q9UHJ9 254 aa14.49□□□□□ -0.09
VPS9D1-202ENST00000561976 ANKRD33BA6NCL7 494 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 TOP3BO95985 862 aaKnown RBP14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 PRKCHP24723 683 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 HMGB2P26583 209 aaKnown RBP14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 CCNFP41002 786 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 GRM1Q13255 1194 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 RAB6CQ53S08 254 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 SCYL2Q6P3W7 929 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 RAPH1Q70E73 1250 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 CAND1Q86VP6 1230 aaKnown RBP14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 STKLD1Q8NE28 680 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 PRPF31Q8WWY3 499 aaKnown RBP14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 ANKRD36BP1Q96IX9 119 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 FRMD8Q9BZ67 464 aaPredicted RBP14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 RAB6CQ9H0N0 254 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 USP29Q9HBJ7 922 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 XAB2Q9HCS7 855 aaKnown RBP14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 ZNF277Q9NRM2 450 aaPredicted RBP14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 DNAJB4Q9UDY4 337 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 TRPC5Q9UL62 973 aaPredicted RBP14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 M0QYV0 167 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 PRPSAP2O60256 369 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 HSPA1LP34931 641 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 EPHB1P54762 984 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 CUL3Q13618 768 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 SURF1Q15526 300 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 TMCO4Q5TGY1 634 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 TRMT10BQ6PF06 316 aaKnown RBP14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 UNC5AQ6ZN44 842 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 ARHGAP18Q8N392 663 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 POU5F2Q8N7G0 328 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 XYLT2Q9H1B5 865 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 EBF3Q9H4W6 596 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 ETNK2Q9NVF9 386 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 THAP1Q9NVV9 213 aa14.48□□□□□ -0.09
VPS9D1-202ENST00000561976 WNT10BO00744 389 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 FAM189A1O60320 539 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 OPHN1O60890 802 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 SNNO75324 88 aaPredicted RBP14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 BCAR1P56945 870 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 WASHC5Q12768 1159 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 ASPHQ12797 758 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 ACAP1Q15027 740 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 C15orf59Q2T9L4 293 aaPredicted RBP14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 ZNF667Q5HYK9 610 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 EFHC1Q5JVL4 640 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 KRT27Q7Z3Y8 459 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 FLAD1Q8NFF5 587 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 SHKBP1Q8TBC3 707 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 SLC26A7Q8TE54 656 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 DEPDC1BQ8WUY9 529 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 APBB2Q92870 758 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 RNF157Q96PX1 679 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 CENPKQ9BS16 269 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 C1orf21Q9H246 121 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms