RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 RARGP13631 454 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 BMP6P22004 513 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 EIF2DP41214 584 aaKnown RBP10.84□□□□□ -0.67
CLK3-205ENST00000561673 GRIA2P42262 883 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 ARHGAP8P85298 464 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 LMNB2Q03252 620 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 GAD2Q05329 585 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 STIM1Q13586 685 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 EMC10Q5UCC4 262 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 KLHDC10Q6PID8 442 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 DGLUCYQ7Z3D6 616 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 CCDC186Q7Z3E2 898 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 SCD5Q86SK9 330 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 KBTBD6Q86V97 674 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 TMEM25Q86YD3 366 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 ETFBKMTQ8IXQ9 262 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 PHTF2Q8N3S3 785 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 CCDC33Q8N5R6 958 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 NAT16Q8N8M0 369 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 SLC35C1Q96A29 364 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 UBXN6Q9BZV1 441 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 FAM124BQ9H5Z6 455 aaPredicted RBP10.84□□□□□ -0.67
CLK3-205ENST00000561673 ARHGEF4Q9NR80 690 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 SPHK2Q9NRA0 654 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 SEMA4GQ9NTN9 838 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLK3-205ENST00000561673 NUDT5Q9UKK9 219 aa10.84□□□□□ -0.67
CLK3-205ENST00000561673 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.84□□□□□ -0.67
CLK3-205ENST00000561673 PPP1R3GB7ZBB8 358 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 DCLK1O15075 740 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 MDM4O15151 490 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 HOXC11O43248 304 aaPredicted RBP10.83□□□□□ -0.68
CLK3-205ENST00000561673 APODP05090 189 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 TIE1P35590 1138 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 TNFRSF4P43489 277 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 PSEN1P49768 467 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 MRPS21P82921 87 aaKnown RBP10.83□□□□□ -0.68
CLK3-205ENST00000561673 KDSRQ06136 332 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 CUL2Q13617 745 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 CSRP2Q16527 193 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 ANO4Q32M45 955 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 C10orf120Q5SQS8 335 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 BTBD8Q5XKL5 378 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 ARHGAP17Q68EM7 881 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 KLHL10Q6JEL2 608 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 ALLCQ8N6M5 410 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 IL17RCQ8NAC3 791 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 ANKRD52Q8NB46 1076 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 LOXL4Q96JB6 756 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 ZC3H10Q96K80 434 aaKnown RBP10.83□□□□□ -0.68
CLK3-205ENST00000561673 CEP63Q96MT8 703 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 MFRPQ9BY79 579 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 METTL14Q9HCE5 456 aaKnown RBP10.83□□□□□ -0.68
CLK3-205ENST00000561673 DNMT3LQ9UJW3 386 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 NAGPAQ9UK23 515 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 MMP17Q9ULZ9 603 aa10.83□□□□□ -0.68
CLK3-205ENST00000561673 HELZP42694 1942 aaKnown RBP10.83□□□□□ -0.68
CLK3-205ENST00000561673 TBC1D3BA6NDS4 549 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.82□□□□□ -0.68
CLK3-205ENST00000561673 TULP2O00295 520 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 BIN1O00499 593 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 TRIM24O15164 1050 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 TULP3O75386 442 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 KLF8O95600 359 aaPredicted RBP10.82□□□□□ -0.68
CLK3-205ENST00000561673 HNRNPLP14866 589 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLK3-205ENST00000561673 SDHBP21912 280 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 KIR2DL1P43626 348 aaPredicted RBP10.82□□□□□ -0.68
CLK3-205ENST00000561673 PLA2G4AP47712 749 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 FMO5P49326 533 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 DGKEP52429 567 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 ATXN1P54253 815 aaKnown RBP10.82□□□□□ -0.68
CLK3-205ENST00000561673 GOLGA8FQ08AF8 430 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 GOLGA8DPQ0D2H9 430 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 LRMPQ12912 555 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 MORC3Q14149 939 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 CCDC6Q16204 474 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 CRY1Q16526 586 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 PLK5Q496M5 336 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 RAB41Q5JT25 222 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 TTI2Q6NXR4 508 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 TMEM92Q6UXU6 159 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 PRR23CQ6ZRP0 262 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 TPGS1Q6ZTW0 290 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 PIGZQ86VD9 579 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 TTC30AQ86WT1 665 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 ZNF276Q8N554 614 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 TXNDC5Q8NBS9 432 aaKnown RBP10.82□□□□□ -0.68
CLK3-205ENST00000561673 TSTD1Q8NFU3 115 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 KCNV2Q8TDN2 545 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 NELFBQ8WX92 580 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 ARRDC1-AS1Q9H2J1 176 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 ZDHHC4Q9NPG8 344 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 CLIC5Q9NZA1 410 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 DEC1Q9P2X7 70 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 CDV3Q9UKY7 258 aaKnown RBP10.82□□□□□ -0.68
CLK3-205ENST00000561673 INVSQ9Y283 1065 aa10.82□□□□□ -0.68
CLK3-205ENST00000561673 ATG2BQ96BY7 2078 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 CACNA1AO00555 2505 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 NEDD8-MDP1E9PL57 170 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 SGK1O00141 431 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms