RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PNKPQ96T60 521 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 NAP1L3Q99457 506 aaPredicted RBP7.89□□□□□ -1.15
TPM1-231ENST00000561395 HNRNPABQ99729 332 aaKnown RBP7.89□□□□□ -1.15
TPM1-231ENST00000561395 RTP3Q9BQQ7 232 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 RHOXF2Q9BQY4 288 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 EPC1Q9H2F5 836 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 MFSD1Q9H3U5 465 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 SMOC2Q9H3U7 446 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 CRTAC1Q9NQ79 661 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 ST7Q9NRC1 585 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 METTL5Q9NRN9 209 aaKnown RBP7.89□□□□□ -1.15
TPM1-231ENST00000561395 DDX43Q9NXZ2 648 aaKnown RBP7.89□□□□□ -1.15
TPM1-231ENST00000561395 KANSL3Q9P2N6 904 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 CDH9Q9ULB4 789 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 SORCS3Q9UPU3 1222 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 PCDHB7Q9Y5E2 793 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 TIMM13Q9Y5L4 95 aaPredicted RBP7.89□□□□□ -1.15
TPM1-231ENST00000561395 MRPL42Q9Y6G3 142 aaKnown RBP7.89□□□□□ -1.15
TPM1-231ENST00000561395 VWA8A3KMH1 1905 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 FAM208BQ5VWN6 2430 aa7.89□□□□□ -1.15
TPM1-231ENST00000561395 RALGAPA1Q6GYQ0 2036 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 F8W810 466 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 CLDN5O00501 218 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 KRIT1O00522 736 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 HOXA2O43364 376 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 LMNAP02545 664 aaKnown RBP7.88□□□□□ -1.15
TPM1-231ENST00000561395 FGGP02679 453 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 PYGMP11217 842 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 NPR3P17342 541 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 PSMA2P25787 234 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 RFC1P35251 1148 aaPredicted RBP7.88□□□□□ -1.15
TPM1-231ENST00000561395 SCNN1AP37088 669 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 ACADSBP45954 432 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 PLA2G4AP47712 749 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 OR1G1P47890 313 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 GATMP50440 423 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 CLCN5P51795 746 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 TAS2R40P59535 323 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 RNASELQ05823 741 aaKnown RBP7.88□□□□□ -1.15
TPM1-231ENST00000561395 ANGPT1Q15389 498 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 ST3GAL2Q16842 350 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 LONRF2Q1L5Z9 754 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 GLE1Q53GS7 698 aaKnown RBP7.88□□□□□ -1.15
TPM1-231ENST00000561395 LRRC38Q5VT99 294 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 DAB2IPQ5VWQ8 1189 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 CWF19L1Q69YN2 538 aaKnown RBP7.88□□□□□ -1.15
TPM1-231ENST00000561395 OR6B2Q6IFH4 312 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 AADACL2Q6P093 401 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 FBXO38Q6PIJ6 1188 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 PAQR9Q6ZVX9 377 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 FAM35AQ86V20 835 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 METTL23Q86XA0 190 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 ZDHHC17Q8IUH5 632 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 NPAS4Q8IUM7 802 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 RHOT1Q8IXI2 618 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 KATNAL2Q8IYT4 538 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 ABI1Q8IZP0 508 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 KLHL23Q8NBE8 558 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 VN1R2Q8NFZ6 395 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 RUBCNQ92622 972 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 PIWIL1Q96J94 861 aaKnown RBP7.88□□□□□ -1.15
TPM1-231ENST00000561395 HSFY1Q96LI6 401 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 CASD1Q96PB1 797 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 ACBD6Q9BR61 282 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 DUSP16Q9BY84 665 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 B3GNT5Q9BYG0 378 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 PARD6BQ9BYG5 372 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 TLE6Q9H808 572 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 AAASQ9NRG9 546 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 DLL3Q9NYJ7 618 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 DNAJB4Q9UDY4 337 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 RAB21Q9UL25 225 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 LRFN2Q9ULH4 789 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 USTQ9Y2C2 406 aa7.88□□□□□ -1.15
TPM1-231ENST00000561395 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.88□□□□□ -1.15
TPM1-231ENST00000561395 CACNA1IQ9P0X4 2223 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 GOLGA6L10A0A0M3HER8 536 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 MYBPHLA2RUH7 354 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 C2CD4BA6NLJ0 364 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 F8VP50 259 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 CCDC188H7C350 402 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 PIK3R2O00459 728 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 PER2O15055 1255 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 PAPSS1O43252 624 aaPredicted RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 LRCH4O75427 683 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 AP1G2O75843 785 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 DGKIO75912 1065 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 TUBBP07437 444 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 FAM200BP0CF97 657 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 TCF4P15884 667 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 GPD1P21695 349 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 SSR1P43307 286 aaKnown RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 ZNF143P52747 638 aaPredicted RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 SLC8A3P57103 927 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 SLC6A3Q01959 620 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 SLC25A11Q02978 314 aaKnown RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 ACAP1Q15027 740 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 INTS6LQ5JSJ4 861 aaKnown RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 OVOS1Q6IE37 1185 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 CCDC70Q6NSX1 233 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms