RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 MARK1Q9P0L2 795 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 CALCOCO1Q9P1Z2 691 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 RALYQ9UKM9 306 aaKnown RBP12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 MSRB2Q9Y3D2 182 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 GON4LQ3T8J9 2241 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 CHD6Q8TD26 2715 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 CACNG3O60359 315 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 GREM1O60565 184 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 TLR5O60602 858 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 AP1G2O75843 785 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 CASP4P49662 377 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 NCOA4Q13772 614 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 SGSM1Q2NKQ1 1148 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 SDE2Q6IQ49 451 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 ACOT1Q86TX2 421 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 MIB1Q86YT6 1006 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 GOLGA5Q8TBA6 731 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 TMEM174Q8WUU8 243 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 XPO6Q96QU8 1125 aaKnown RBP12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 SMOQ99835 787 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 GABRG3Q99928 467 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 KLF16Q9BXK1 252 aaPredicted RBP12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 SDCBP2Q9H190 292 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 CYLDQ9NQC7 956 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 TLR8Q9NR97 1041 aaKnown RBP12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 WDR35Q9P2L0 1181 aa12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 ATXN2Q99700 1313 aaKnown RBP12.51□□□□□ -0.41
CARMIL3-204ENST00000561354 CEP295Q9C0D2 2601 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 IGHV1OR15-9A0A0B4J2B8 117 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 SPAARA0A1B0GVQ0 90 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 A0A1W2PQD8 194 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 FAM221BA6H8Z2 402 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 SRRM3A6NNA2 597 aaPredicted RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 LRRIQ3A6PVS8 624 aaPredicted RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 H0Y626 953 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 TRIM24O15164 1050 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 POLR2DO15514 142 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 HYAL3O43820 417 aaPredicted RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 OPHN1O60890 802 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 BEST1O76090 585 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 TRIM16O95361 564 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 P4HA1P13674 534 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 RDXP35241 583 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 ATP5C1P36542 298 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 PGFP49763 221 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 SIM1P81133 766 aaPredicted RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 GOLGA8FQ08AF8 430 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 GOLGA8DPQ0D2H9 430 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 HNRNPDQ14103 355 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 EGFLAMQ63HQ2 1017 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 KLHDC10Q6PID8 442 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 UNC93AQ86WB7 457 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 SLC9A9Q8IVB4 645 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 SLC41A1Q8IVJ1 513 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 CHPFQ8IZ52 775 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 SLC2A14Q8TDB8 520 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 TAF4BQ92750 862 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 GTPBP2Q9BX10 602 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 BBS2Q9BXC9 721 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 BLZF1Q9H2G9 400 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 SLC39A2Q9NP94 309 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 DNAJC17Q9NVM6 304 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 DMAC2Q9NW81 257 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 LSM7Q9UK45 103 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 CEP192Q8TEP8 1941 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 FAM208BQ5VWN6 2430 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 LAMA1P25391 3075 aa12.5□□□□□ -0.41
CARMIL3-204ENST00000561354 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 PRRT4C9JH25 899 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 NEDD8-MDP1E9PL57 170 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 GFRA2O00451 464 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 CLSTN1O94985 981 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 VNN1O95497 513 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 SYPP08247 313 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 IRF1P10914 325 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 CCDC130P13994 396 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 TYRP14679 529 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 NDUFV2P19404 249 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 CASP1P29466 404 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 WASP42768 502 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 SLC14A1Q13336 389 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 KIAA1211LQ6NV74 962 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 MINDY1Q8N5J2 469 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 DEFB119Q8N690 84 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 ZCCHC14Q8WYQ9 949 aaKnown RBP12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 ZNF419Q96HQ0 510 aaPredicted RBP12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 ACOX2Q99424 681 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 FAM124BQ9H5Z6 455 aaPredicted RBP12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 FSCN3Q9NQT6 498 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 DNAAF2Q9NVR5 837 aaKnown RBP12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 SCML2Q9UQR0 700 aa12.49□□□□□ -0.41
CARMIL3-204ENST00000561354 IKBKBO14920 756 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 TBX18O95935 607 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 ASS1P00966 412 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms