RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 ID2Q02363 134 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 ZNF91Q05481 1191 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 DEUP1Q05D60 604 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 KCNB1Q14721 858 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 LEXMQ3ZCV2 418 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 USP49Q70CQ1 688 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 RAVER1Q8IY67 606 aaKnown RBP4.41□□□□□ -1.7
CASC4-211ENST00000561305 METTL25Q8N6Q8 603 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 PNPLA1Q8N8W4 532 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 NSMCE1Q8WV22 266 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 ZNF668Q96K58 619 aaPredicted RBP4.41□□□□□ -1.7
CASC4-211ENST00000561305 HS6ST2Q96MM7 605 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 ASAP1Q9ULH1 1129 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 CAPN11Q9UMQ6 739 aa4.41□□□□□ -1.7
CASC4-211ENST00000561305 FAM90A10PA6NDY2 464 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 AQP7P3A6NL99 342 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 ZKSCAN1P17029 563 aaPredicted RBP4.4□□□□□ -1.71
CASC4-211ENST00000561305 CCKBRP32239 447 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 ITGA8P53708 1063 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 CACNB3P54284 484 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 RPS16P62249 146 aaKnown RBP4.4□□□□□ -1.71
CASC4-211ENST00000561305 RPS13P62277 151 aaKnown RBP4.4□□□□□ -1.71
CASC4-211ENST00000561305 NXNQ6DKJ4 435 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 TCEAL8Q8IYN2 117 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 NGDNQ8NEJ9 315 aaKnown RBP4.4□□□□□ -1.71
CASC4-211ENST00000561305 ZDHHC12Q96GR4 267 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 APIPQ96GX9 242 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 HIC2Q96JB3 615 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 FOXP1Q9H334 677 aaPredicted RBP4.4□□□□□ -1.71
CASC4-211ENST00000561305 FAM204AQ9H8W3 233 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 TMEM184CQ9NVA4 438 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 SEMA5BQ9P283 1151 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 STEAP1Q9UHE8 339 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 VPS51Q9UID3 782 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 MID2Q9UJV3 735 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 HDAC9Q9UKV0 1011 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 FZD4Q9ULV1 537 aa4.4□□□□□ -1.71
CASC4-211ENST00000561305 NOB1Q9ULX3 412 aaKnown RBP4.4□□□□□ -1.71
CASC4-211ENST00000561305 RAB27BO00194 218 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 HRGP04196 525 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 MYF5P13349 255 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 ADRA1DP25100 572 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 GPC5P78333 572 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 HSF1Q00613 529 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 SLC14A1Q13336 389 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 CLCA4Q14CN2 919 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 POLD3Q15054 466 aaPredicted RBP4.39□□□□□ -1.71
CASC4-211ENST00000561305 NFE2Q16621 373 aaPredicted RBP4.39□□□□□ -1.71
CASC4-211ENST00000561305 ST3GAL2Q16842 350 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 RNF220Q5VTB9 566 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 PLAG1Q6DJT9 500 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 SESTD1Q86VW0 696 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 YAF2Q8IY57 180 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 FAM177A1Q8N128 213 aaPredicted RBP4.39□□□□□ -1.71
CASC4-211ENST00000561305 MAGEB6Q8N7X4 407 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 SMCR8Q8TEV9 937 aaPredicted RBP4.39□□□□□ -1.71
CASC4-211ENST00000561305 WIPF2Q8TF74 440 aaPredicted RBP4.39□□□□□ -1.71
CASC4-211ENST00000561305 LRTOMTQ8WZ04 291 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 WASF1Q92558 559 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 ZFYVE19Q96K21 471 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 LRRC27Q9C0I9 530 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 HEY2Q9UBP5 337 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 ZNF580Q9UK33 172 aa4.39□□□□□ -1.71
CASC4-211ENST00000561305 FYB1O15117 783 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 INMTO95050 263 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 OAZ2O95190 189 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 SCGB1D2O95969 90 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 TPH1P17752 444 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 TKTP29401 623 aaKnown RBP4.38□□□□□ -1.71
CASC4-211ENST00000561305 CCKARP32238 428 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 COPAP53621 1224 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 STK3Q13188 491 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 KLHL22Q53GT1 634 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 ODR4Q5SWX8 454 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 MZT2AQ6P582 158 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 SRGAP1Q7Z6B7 1085 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.38□□□□□ -1.71
CASC4-211ENST00000561305 C11orf44Q8N8P7 122 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 MSLNLQ96KJ4 702 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 HIST1H2AAQ96QV6 131 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 SELENOOQ9BVL4 669 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 DNAJB11Q9UBS4 358 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 OGDHLQ9ULD0 1010 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 SLC27A6Q9Y2P4 619 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 SPATA31A1Q5TZJ5 1347 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 COL15A1P39059 1388 aa4.38□□□□□ -1.71
CASC4-211ENST00000561305 ZBED1O96006 694 aa4.37□□□□□ -1.71
CASC4-211ENST00000561305 TOMM40O96008 361 aa4.37□□□□□ -1.71
CASC4-211ENST00000561305 CYP19A1P11511 503 aaPredicted RBP4.37□□□□□ -1.71
CASC4-211ENST00000561305 TACR3P29371 465 aa4.37□□□□□ -1.71
CASC4-211ENST00000561305 NTSR1P30989 418 aa4.37□□□□□ -1.71
CASC4-211ENST00000561305 ME1P48163 572 aa4.37□□□□□ -1.71
CASC4-211ENST00000561305 EIF4A1P60842 406 aaKnown RBP4.37□□□□□ -1.71
CASC4-211ENST00000561305 YPEL5P62699 121 aa4.37□□□□□ -1.71
CASC4-211ENST00000561305 PFKFB3Q16875 520 aaPredicted RBP4.37□□□□□ -1.71
CASC4-211ENST00000561305 ARHGAP29Q52LW3 1261 aa4.37□□□□□ -1.71
CASC4-211ENST00000561305 CC2D1BQ5T0F9 858 aaKnown RBP4.37□□□□□ -1.71
CASC4-211ENST00000561305 MANEALQ5VSG8 457 aa4.37□□□□□ -1.71
CASC4-211ENST00000561305 RUSC1-AS1Q66K80 236 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms