RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 TTC30AQ86WT1 665 aa18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 UBR7Q8N806 425 aa18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 USP33Q8TEY7 942 aa18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 RMDN1Q96DB5 314 aa18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 OTUB2Q96DC9 234 aa18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 KLF16Q9BXK1 252 aaPredicted RBP18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 FAM124BQ9H5Z6 455 aaPredicted RBP18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 PARD6AQ9NPB6 346 aa18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 USP18Q9UMW8 372 aa18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 DNAH14Q0VDD8 3507 aa18.11■□□□□ 0.49
CDC42BPB-208ENST00000561271 ADAMTS9Q9P2N4 1935 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 TULP2O00295 520 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 KAT7O95251 611 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 CD19P15391 556 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 YWHAEP62258 255 aaKnown RBP18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 SPEM2Q0P670 501 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 FAM160A2Q8N612 972 aaPredicted RBP18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 NAT16Q8N8M0 369 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 NT5C1BQ96P26 610 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 PNKPQ96T60 521 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 ARHGEF4Q9NR80 690 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 TSPAN16Q9UKR8 245 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 USP3Q9Y6I4 520 aa18.1■□□□□ 0.49
CDC42BPB-208ENST00000561271 CNOT1A5YKK6 2376 aaKnown RBP18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 GREM1O60565 184 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 RPP40O75818 363 aaKnown RBP18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 APODP05090 189 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 TBXAS1P24557 533 aaPredicted RBP18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 EIF2DP41214 584 aaKnown RBP18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 BCAT1P54687 386 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 UBE2HP62256 183 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 GAD2Q05329 585 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 GOLGA8FQ08AF8 430 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 GOLGA8DPQ0D2H9 430 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 CAMK4Q16566 473 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 ANO4Q32M45 955 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 SGO2Q562F6 1265 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 TMEM25Q86YD3 366 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 MIB1Q86YT6 1006 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 ETFBKMTQ8IXQ9 262 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 PHTF2Q8N3S3 785 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 CCDC33Q8N5R6 958 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 CAMKK1Q8N5S9 505 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 ANKRD52Q8NB46 1076 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 GAB3Q8WWW8 586 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 KAT5Q92993 513 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 ZDHHC4Q9NPG8 344 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 SPHK2Q9NRA0 654 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 RASAL2Q9UJF2 1139 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 DNMT3LQ9UJW3 386 aa18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 LSM7Q9UK45 103 aaKnown RBP18.09■□□□□ 0.49
CDC42BPB-208ENST00000561271 CCDC163A0A0D9SF12 145 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 AXIN1O15169 862 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 HOXC11O43248 304 aaPredicted RBP18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 APBB3O95704 486 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 CCDC192P0DO97 292 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 CHRM1P11229 460 aaPredicted RBP18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 TGM1P22735 817 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 PSEN1P49768 467 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 PDE4CQ08493 712 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 RAB41Q5JT25 222 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 KLHDC10Q6PID8 442 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 FOXR2Q6PJQ5 311 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 HTR3DQ70Z44 454 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 PPM1KQ8N3J5 372 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 ALLCQ8N6M5 410 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 CHMP5Q9NZZ3 219 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 MMP17Q9ULZ9 603 aa18.08■□□□□ 0.48
CDC42BPB-208ENST00000561271 MUC22E2RYF6 1773 aaPredicted RBP18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 TULP3O75386 442 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 KLF8O95600 359 aaPredicted RBP18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 RETP07949 1114 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 RALAP11233 206 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 TIE1P35590 1138 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 TKTL1P51854 596 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 SLC8A3P57103 927 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 ADIGQ0VDE8 80 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 EFEMP1Q12805 493 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 BTBD8Q5XKL5 378 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 TMEM270Q6UE05 265 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 KBTBD6Q86V97 674 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 ARHGEF19Q8IW93 802 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 TRIM59Q8IWR1 403 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 TSTD1Q8NFU3 115 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 CCDC26Q8TAB7 109 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 LMO3Q8TAP4 145 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 ULBP1Q9BZM6 244 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 CLIC5Q9NZA1 410 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 HESX1Q9UBX0 185 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 PCDHB4Q9Y5E5 795 aa18.07■□□□□ 0.48
CDC42BPB-208ENST00000561271 TP53BP1Q12888 1972 aaPredicted RBP18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 NEDD8-MDP1E9PL57 170 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 O00370 1275 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 XPO1O14980 1071 aaKnown RBP18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 TRIM24O15164 1050 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 PMM2O15305 246 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 STC2O76061 302 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 CALCAP01258 141 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 HMBSP08397 361 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms