RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FAM71DQ8N9W8 422 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 FAM46DQ8NEK8 389 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 FBXO18Q8NFZ0 1043 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 NEDD1Q8NHV4 660 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CCDC110Q8TBZ0 833 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 IGDCC4Q8TDY8 1250 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ZNF384Q8TF68 577 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PRPF31Q8WWY3 499 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 CASKIN2Q8WXE0 1202 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MAML1Q92585 1016 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 EZH1Q92800 747 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 ARHGEF2Q92974 986 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 KTI12Q96EK9 354 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 PGAP3Q96FM1 320 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 VPS39Q96JC1 886 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MAP6Q96JE9 813 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ZNF668Q96K58 619 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 CABS1Q96KC9 395 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 C5orf34Q96MH7 638 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PSMG3-AS1Q96PY0 264 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PPP1R10Q96QC0 940 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 JMJD8Q96S16 334 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 FUZQ9BT04 418 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 HTATIP2Q9BUP3 242 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 DPH1Q9BZG8 443 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PITHD1Q9GZP4 211 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 VPS16Q9H269 839 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TAOK3Q9H2K8 898 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ADAM7Q9H2U9 754 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 NDST4Q9H3R1 872 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SEMA6BQ9H3T3 888 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PRDM13Q9H4Q3 707 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MROH8Q9H579 483 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TRPV4Q9HBA0 871 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 BARX1Q9HBU1 254 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.18□□□□□ -2.06
RTF1-207ENST00000561076 SNTG1Q9NSN8 517 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 DCAF16Q9NXF7 216 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 DDX43Q9NXZ2 648 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 AATFQ9NY61 560 aaKnown RBP eCLIP2.18□□□□□ -2.06
RTF1-207ENST00000561076 KCND2Q9NZV8 630 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MARCH4Q9P2E8 410 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 ARHGAP20Q9P2F6 1191 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 NCDNQ9UBB6 729 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 RABL2AQ9UBK7 228 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 CACNG4Q9UBN1 327 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 UBA2Q9UBT2 640 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 TSPYL4Q9UJ04 414 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MAGEL2Q9UJ55 1249 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 FBXL5Q9UKA1 691 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SARDHQ9UL12 918 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SHOC2Q9UQ13 582 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CNTN6Q9UQ52 1028 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MTMR6Q9Y217 621 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CHKBQ9Y259 395 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TELO2Q9Y4R8 837 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CCL27Q9Y4X3 112 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ENTPD2Q9Y5L3 495 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SESN1Q9Y6P5 492 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 LOC100509620A0A075B734 347 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TMEM265A0A087WTH1 108 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 A0A087WWL8 130 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 FAM237BA0A1B0GVD1 139 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TMEM82A0PJX8 343 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 LRRD1A4D1F6 860 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 A6NL46 340 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 LRRC53A6NM62 1247 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 A8MXE2 369 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KIF28PB7ZC32 967 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 F8W031 263 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 PI4K2BG5E9Z4 385 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 H0YC42 278 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 PES1O00541 588 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 UBE2CO00762 179 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 NRP1O14786 923 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 PGRMC2O15173 223 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 SLC7A4O43246 635 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ADCY6O43306 1168 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KCNQ3O43525 872 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 PRPSAP2O60256 369 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CCNT1O60563 726 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 FMO6PO60774 539 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TBX10O75333 385 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 SEC22BO75396 215 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ITGA10O75578 1167 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ALDH1A2O94788 518 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 SEC24DO94855 1032 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 ALX3O95076 343 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CSPG5O95196 566 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KIF20AO95235 890 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CHEK2O96017 543 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CFIP05156 583 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 EIF2S1P05198 315 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 RB1P06400 928 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 PCP11498 1178 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 RARGP13631 454 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 COX7A2P14406 83 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 NID1P14543 1247 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ELNP15502 786 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TMEM11P17152 192 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms