RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CALN1Q9BXU9 219 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 MAK16Q9BXY0 300 aaKnown RBP17.86■□□□□ 0.45
HDDC3-206ENST00000561036 RHOBTB2Q9BYZ6 727 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 PLEKHA4Q9H4M7 779 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 LTBP2Q14767 1821 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 NLRC5Q86WI3 1866 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 PTPRDP23468 1912 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 YJEFN3A6XGL0 299 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 E7ENQ6 273 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 CAPN9O14815 690 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 TRIM66O15016 1216 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 TBC1D4O60343 1298 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 CST8O60676 142 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 SASH3O75995 380 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 EFEMP2O95967 443 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 ITGAVP06756 1048 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 USP17L7P0C7H9 530 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 RAG1P15918 1043 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 ECHS1P30084 290 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 RDXP35241 583 aaKnown RBP17.85■□□□□ 0.45
HDDC3-206ENST00000561036 GRIK1P39086 918 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 VCPP55072 806 aaKnown RBP17.85■□□□□ 0.45
HDDC3-206ENST00000561036 ADCY2Q08462 1091 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 BYSLQ13895 437 aaKnown RBP17.85■□□□□ 0.45
HDDC3-206ENST00000561036 DPYSL2Q16555 572 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 RAB6CQ53S08 254 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 SND1Q7KZF4 910 aaKnown RBP eCLIP17.85■□□□□ 0.45
HDDC3-206ENST00000561036 BHLHA9Q7RTU4 235 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 PATJQ8NI35 1801 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 C2orf15Q8WU43 125 aaKnown RBP17.85■□□□□ 0.45
HDDC3-206ENST00000561036 NDRG1Q92597 394 aaKnown RBP17.85■□□□□ 0.45
HDDC3-206ENST00000561036 FAF2Q96CS3 445 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 RNF157Q96PX1 679 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 TTPALQ9BTX7 342 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 RAB6CQ9H0N0 254 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 PCDH18Q9HCL0 1135 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 WHRNQ9P202 907 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 RCOR3Q9P2K3 495 aaPredicted RBP17.85■□□□□ 0.45
HDDC3-206ENST00000561036 PCNTO95613 3336 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 DNAH12Q6ZR08 3092 aa17.85■□□□□ 0.45
HDDC3-206ENST00000561036 COL4A4P53420 1690 aaPredicted RBP17.84■□□□□ 0.45
HDDC3-206ENST00000561036 TRIM43BA6NCK2 446 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 APOC4-APOC2K7ER74 178 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 TNFRSF10BO14763 440 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 BAIAP3O94812 1187 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 UPP2O95045 317 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 F9P00740 461 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 APOC2P02655 101 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 FYNP06241 537 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 CD48P09326 243 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 TFE3P19532 575 aaPredicted RBP17.84■□□□□ 0.45
HDDC3-206ENST00000561036 CYP2F1P24903 491 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 KRT17Q04695 432 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 TRADDQ15628 312 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 HFE2Q6ZVN8 426 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 CEP57Q86XR8 500 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 RFX6Q8HWS3 928 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 CCDC89Q8N998 374 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 SLC35B2Q8TB61 432 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 TRIM43Q96BQ3 446 aaPredicted RBP17.84■□□□□ 0.45
HDDC3-206ENST00000561036 ZNF689Q96CS4 500 aaPredicted RBP17.84■□□□□ 0.45
HDDC3-206ENST00000561036 DPH5Q9H2P9 285 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 CWH43Q9H720 699 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 OGFRQ9NZT2 677 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 NEU2Q9Y3R4 380 aa17.84■□□□□ 0.45
HDDC3-206ENST00000561036 M0QYT0 321 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 OR4Q2P0C623 313 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 HSPA1AP0DMV8 641 aaKnown RBP17.83■□□□□ 0.44
HDDC3-206ENST00000561036 HSPA1BP0DMV9 641 aaKnown RBP17.83■□□□□ 0.44
HDDC3-206ENST00000561036 ZFXP17010 805 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-206ENST00000561036 TGM2P21980 687 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 L1CAMP32004 1257 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 DEUP1Q05D60 604 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 GPS2Q13227 327 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 GPR17Q13304 367 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 OASLQ15646 514 aaKnown RBP17.83■□□□□ 0.44
HDDC3-206ENST00000561036 OTUD1Q5VV17 481 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-206ENST00000561036 SYPL2Q5VXT5 272 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 DDX42Q86XP3 938 aaKnown RBP eCLIP17.83■□□□□ 0.44
HDDC3-206ENST00000561036 CMTR2Q8IYT2 770 aaKnown RBP17.83■□□□□ 0.44
HDDC3-206ENST00000561036 BBOF1Q8ND07 529 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 SPPL2BQ8TCT7 592 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 NTAN1Q96AB6 310 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 LRRC45Q96CN5 670 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 CCDC114Q96M63 670 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 ADAM33Q9BZ11 813 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 PRDM5Q9NQX1 630 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-206ENST00000561036 ZDHHC18Q9NUE0 388 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 COMMD8Q9NX08 183 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 ABI2Q9NYB9 513 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-206ENST00000561036 GRHL1Q9NZI5 618 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 DNPEPQ9ULA0 475 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 FZD10Q9ULW2 581 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 AP4E1Q9UPM8 1137 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 NAALADL1Q9UQQ1 740 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 SNX24Q9Y343 169 aa17.83■□□□□ 0.44
HDDC3-206ENST00000561036 NDC80O14777 642 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 NCAM1P13591 858 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 CSF2RAP15509 400 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms