RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 TRIM11Q96F44 468 aa12.7□□□□□ -0.38
IRF9-211ENST00000560852 PGAP3Q96FM1 320 aaPredicted RBP12.7□□□□□ -0.38
IRF9-211ENST00000560852 ZSWIM3Q96MP5 696 aa12.7□□□□□ -0.38
IRF9-211ENST00000560852 CHP1Q99653 195 aa12.7□□□□□ -0.38
IRF9-211ENST00000560852 RNF38Q9H0F5 515 aa12.7□□□□□ -0.38
IRF9-211ENST00000560852 NHEJ1Q9H9Q4 299 aaPredicted RBP12.7□□□□□ -0.38
IRF9-211ENST00000560852 POPDC2Q9HBU9 364 aa12.7□□□□□ -0.38
IRF9-211ENST00000560852 ADAM22Q9P0K1 906 aa12.7□□□□□ -0.38
IRF9-211ENST00000560852 IGSF9Q9P2J2 1179 aa12.7□□□□□ -0.38
IRF9-211ENST00000560852 INTUQ9ULD6 942 aa12.7□□□□□ -0.38
IRF9-211ENST00000560852 GREB1Q4ZG55 1949 aa12.7□□□□□ -0.38
IRF9-211ENST00000560852 TRAV19A0A0A6YYK7 116 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 ANKRD62A6NC57 917 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 COCHO43405 550 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 TLR5O60602 858 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 ENDOD1O94919 500 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 LTFP02788 710 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 FTLP02792 175 aaPredicted RBP12.69□□□□□ -0.38
IRF9-211ENST00000560852 PLEKP08567 350 aaPredicted RBP12.69□□□□□ -0.38
IRF9-211ENST00000560852 RARGP13631 454 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 LCP1P13796 627 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 HDCP19113 662 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 SSTR3P32745 418 aaPredicted RBP12.69□□□□□ -0.38
IRF9-211ENST00000560852 ATP5C1P36542 298 aaKnown RBP12.69□□□□□ -0.38
IRF9-211ENST00000560852 EIF4A3P38919 411 aaKnown RBP12.69□□□□□ -0.38
IRF9-211ENST00000560852 KPNA1P52294 538 aaPredicted RBP12.69□□□□□ -0.38
IRF9-211ENST00000560852 RING1Q06587 406 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 FCHO2Q0JRZ9 810 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 GPR158Q5T848 1215 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 TXNDC8Q6A555 127 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 MTSS1LQ765P7 747 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 DDX42Q86XP3 938 aaKnown RBP eCLIP12.69□□□□□ -0.38
IRF9-211ENST00000560852 TMEM139Q8IV31 216 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 AZIN2Q96A70 460 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
IRF9-211ENST00000560852 CCDC42Q96M95 316 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 DDX23Q9BUQ8 820 aaKnown RBP12.69□□□□□ -0.38
IRF9-211ENST00000560852 IRX2Q9BZI1 471 aaPredicted RBP12.69□□□□□ -0.38
IRF9-211ENST00000560852 TRPV5Q9NQA5 729 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 ST7Q9NRC1 585 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 TDP1Q9NUW8 608 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 TJP2Q9UDY2 1190 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 DNMT3LQ9UJW3 386 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 DENND4AQ7Z401 1863 aa12.69□□□□□ -0.38
IRF9-211ENST00000560852 C2orf78A6NCI8 922 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 EIF3CLB5ME19 914 aaKnown RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 C2CD4DB7Z1M9 353 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 GREM1O60565 184 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 SLC34A2O95436 690 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 GJA1P17302 382 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 NOS2P35228 1153 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 MATKP42679 507 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 KCNQ1P51787 676 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 MLLT6P55198 1093 aaPredicted RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 COG7P83436 770 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 MTA1Q13330 715 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 HTR4Q13639 388 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 TDRD12Q587J7 1177 aaKnown RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 TJAP1Q5JTD0 557 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 FAM78AQ5JUQ0 283 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 BTBD8Q5XKL5 378 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 FAM183BPQ6ZVS7 135 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 ARID3BQ8IVW6 561 aaPredicted RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.68□□□□□ -0.38
IRF9-211ENST00000560852 CELF5Q8N6W0 485 aaKnown RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 TDRD5Q8NAT2 981 aaKnown RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 ZSCAN18Q8TBC5 510 aaPredicted RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 FNIP1Q8TF40 1166 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 CLEC4CQ8WTT0 213 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 SLC22A12Q96S37 553 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 EIF3CQ99613 913 aaKnown RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 KLF16Q9BXK1 252 aaPredicted RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 SMOC2Q9H3U7 446 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 TAS2R14Q9NYV8 317 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 STOML2Q9UJZ1 356 aa12.68□□□□□ -0.38
IRF9-211ENST00000560852 HBS1LQ9Y450 684 aaKnown RBP12.68□□□□□ -0.38
IRF9-211ENST00000560852 GOLGA6L6A8MZA4 724 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 DAB1O75553 588 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 LATS1O95835 1130 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 IGLV3-27P01718 113 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 AVPR1AP37288 418 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 ZXDBP98169 803 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 CYP4F8P98187 520 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 TRIP4Q15650 581 aaPredicted RBP12.67□□□□□ -0.38
IRF9-211ENST00000560852 STXBP5Q5T5C0 1151 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 MMS22LQ6ZRQ5 1243 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 HFE2Q6ZVN8 426 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 HTR3DQ70Z44 454 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 GET4Q7L5D6 327 aaPredicted RBP12.67□□□□□ -0.38
IRF9-211ENST00000560852 MFSD6LQ8IWD5 586 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 ARL14EPQ8N8R7 260 aaPredicted RBP12.67□□□□□ -0.38
IRF9-211ENST00000560852 MAB21L3Q8N8X9 362 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 ADAMTS19Q8TE59 1207 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 DEPDC1BQ8WUY9 529 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
IRF9-211ENST00000560852 CENPIQ92674 756 aaPredicted RBP12.67□□□□□ -0.38
IRF9-211ENST00000560852 GOLGA1Q92805 767 aa12.67□□□□□ -0.38
IRF9-211ENST00000560852 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
IRF9-211ENST00000560852 SLC39A13Q96H72 371 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms