RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SEPT9Q9UHD8 586 aaPredicted RBP8.91□□□□□ -0.98
CCDC33-209ENST00000560565 AJAP1Q9UKB5 411 aaPredicted RBP8.91□□□□□ -0.98
CCDC33-209ENST00000560565 ITGB1BP2Q9UKP3 347 aa8.91□□□□□ -0.98
CCDC33-209ENST00000560565 LTBP2Q14767 1821 aa8.91□□□□□ -0.98
CCDC33-209ENST00000560565 A8MUI8 341 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 KRT37O76014 449 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 STK10O94804 968 aaKnown RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 TMCC1O94876 653 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 KLHL2O95198 593 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 LSM8O95777 96 aaKnown RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 CD4P01730 458 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 MMP3P08254 477 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 TRIM49P0CI25 452 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 TRIM49CP0CI26 452 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 DESP17661 470 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 ITGB8P26012 769 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 KLRC2P26717 231 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 CRABP2P29373 138 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 NMT1P30419 496 aaKnown RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 FOXN2P32314 431 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 CHKAP35790 457 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 KCNJ1P48048 391 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 AP3M2P53677 418 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 POLE2P56282 527 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 WDR4P57081 412 aaKnown RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 GTF2BQ00403 316 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 FOXK2Q01167 660 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 FMO1Q01740 532 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 SP4Q02446 784 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 MGAT5Q09328 741 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 SFSWAPQ12872 951 aaKnown RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 CBLBQ13191 982 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 DMP1Q13316 513 aaPredicted RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 MED21Q13503 144 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 P3H1Q32P28 736 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 HSDL1Q3SXM5 330 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 FAM47CQ5HY64 1035 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 ZNF484Q5JVG2 852 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 THEMIS2Q5TEJ8 643 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 TMCO4Q5TGY1 634 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 KLC3Q6P597 504 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 LVRNQ6Q4G3 990 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 ADGRD1Q6QNK2 874 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 ACAD11Q709F0 780 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 OTOAQ7RTW8 1153 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 POLNQ7Z5Q5 900 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 MTDHQ86UE4 582 aaKnown RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 MCOLN2Q8IZK6 566 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 KIRREL3Q8IZU9 778 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 ALLCQ8N6M5 410 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 PYROXD1Q8WU10 500 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 SLC20A1Q8WUM9 679 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 C1orf54Q8WWF1 131 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 EZH1Q92800 747 aaPredicted RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 NKD2Q969F2 451 aaPredicted RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 PTCD3Q96EY7 689 aaKnown RBP8.9□□□□□ -0.98
CCDC33-209ENST00000560565 IFT43Q96FT9 208 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 C7orf26Q96N11 449 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 BTBD9Q96Q07 612 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 PCYT2Q99447 389 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 ZNF518BQ9C0D4 1074 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 TRPV6Q9H1D0 765 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 ACSS3Q9H6R3 686 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 BCAS3Q9H6U6 928 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 TIMMDC1Q9NPL8 285 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 MKS1Q9NXB0 559 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 HSPBP1Q9NZL4 362 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 TBK1Q9UHD2 729 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 TAGLN3Q9UI15 199 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 GGT7Q9UJ14 662 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 TBX21Q9UL17 535 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 ZNF148Q9UQR1 794 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 MYO9BQ13459 2157 aa8.9□□□□□ -0.98
CCDC33-209ENST00000560565 PDCD11Q14690 1871 aaKnown RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 ZFHX4Q86UP3 3567 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 POC1B-GALNT4F8VUJ3 575 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 LIASO43766 372 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 ATP9BO43861 1147 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 PEX1O43933 1283 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 B4GALT4O60513 344 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 LPXNO60711 386 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 MAFO75444 373 aaPredicted RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 TM7SF2O76062 418 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 RNF8O76064 485 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 CCDC166P0CW27 439 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 T-ENOLP0DO92 83 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 PIM1P11309 404 aaPredicted RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 IMPDH2P12268 514 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 KRT4P19013 534 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 GARTP22102 1010 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 ACAT1P24752 427 aaKnown RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 CNTFP26441 200 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 NAMPTP43490 491 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 VCPP55072 806 aaKnown RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 FPGSQ05932 587 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 PTPN11Q06124 597 aaPredicted RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 NFX1Q12986 1120 aaKnown RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 PIGHQ14442 188 aaPredicted RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 EMC2Q15006 297 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 MTERF2Q49AM1 385 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms