RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 PARPBPQ9NWS1 579 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 PCDHA7Q9UN72 937 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 DNM3Q9UQ16 869 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 SIK3Q9Y2K2 1263 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 PDS5AQ29RF7 1337 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 FRMPD2Q68DX3 1309 aaPredicted RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 MYO5AQ9Y4I1 1855 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 ABHD14A-ACY1A0A1B0GW23 586 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 LEFTY2O00292 366 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 CPLX1O14810 134 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 ADAMTS3O15072 1205 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 PMM2O15305 246 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 NMT2O60551 498 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 NBNO60934 754 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 LETM1O95202 739 aaPredicted RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 HSPA1AP0DMV8 641 aaKnown RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 HSPA1BP0DMV9 641 aaKnown RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 RGS19P49795 217 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 USP14P54578 494 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 FAM189BP81408 668 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MEF2AQ02078 507 aaPredicted RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 DSC2Q02487 901 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MGAT2Q10469 447 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 IL10RAQ13651 578 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MST1LQ2TV78 715 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 ARHGAP29Q52LW3 1261 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 FAM47AQ5JRC9 791 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MFSD14BQ5SR56 506 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 PRAMEF14Q5SWL7 426 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 C15orf52Q6ZUT6 534 aaKnown RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 USP45Q70EL2 814 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 DOK3Q7L591 496 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 OVCH2Q7RTZ1 564 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 ZNF354CQ86Y25 554 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 LDLRAD3Q86YD5 345 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MIER2Q8N344 545 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 PDILTQ8N807 584 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 ZBTB34Q8NCN2 500 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 LINC00301Q8NCQ3 95 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 VPS37AQ8NEZ2 397 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 PPP1R35Q8TAP8 253 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 RIN2Q8WYP3 895 aaPredicted RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 FATE1Q969F0 183 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 CHFRQ96EP1 664 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 ZNF396Q96N95 335 aaPredicted RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 ACO2Q99798 780 aaKnown RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 SLC26A6Q9BXS9 759 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 NUP62CLQ9H1M0 184 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 KCNH6Q9H252 994 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 AATFQ9NY61 560 aaKnown RBP eCLIP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 GPRC5DQ9NZD1 345 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 POLLQ9UGP5 575 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 NID2Q14112 1375 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 KIF13BQ9NQT8 1826 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 CACNA1SQ13698 1873 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 hCG_1642624A0A1W2PR95 340 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 CCDC69A6NI79 296 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 AHRRA9YTQ3 701 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 DHX16O60231 1041 aaKnown RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 OFD1O75665 1012 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 TOMM70O94826 608 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 UFL1O94874 794 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 PLEKHA8P1O95397 391 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 GYPEP15421 78 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 IFNAR1P17181 557 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 APOBEC3AP31941 199 aaPredicted RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 COPB2P35606 906 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 TOB1P50616 345 aaPredicted RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 ALDH5A1P51649 535 aaPredicted RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 APBA1Q02410 837 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MYBPC2Q14324 1141 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 WTAPQ15007 396 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 PTPAQ15257 358 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 SLC35G1Q2M3R5 365 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 SLC4A8Q2Y0W8 1093 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 C19orf54Q5BKX5 351 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MUM1L1Q5H9M0 696 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 CRB2Q5IJ48 1285 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 ICE2Q659A1 982 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 LVRNQ6Q4G3 990 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MMS22LQ6ZRQ5 1243 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 RHOUQ7L0Q8 258 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 FSIP1Q8NA03 581 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 FANCBQ8NB91 859 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 SLC35B2Q8TB61 432 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 TBC1D16Q8TBP0 767 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 BICD2Q8TD16 824 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 NUP133Q8WUM0 1156 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 NEU4Q8WWR8 484 aaPredicted RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 KAT5Q92993 513 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MVB12AQ96EY5 273 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 DYNLL2Q96FJ2 89 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 RBM17Q96I25 401 aaKnown RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 NEU1Q99519 415 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MAP3K14Q99558 947 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 PDCD2LQ9BRP1 358 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MLST8Q9BVC4 326 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 NAA15Q9BXJ9 866 aaKnown RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 TEX101Q9BY14 249 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms