RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CCDC127Q96BQ5 260 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 OTUB2Q96DC9 234 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 CLIC6Q96NY7 704 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 XPO6Q96QU8 1125 aaKnown RBP11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 CCSER2Q9H7U1 834 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 HSPBP1Q9NZL4 362 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 SUSD2Q9UGT4 822 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 LSM7Q9UK45 103 aaKnown RBP11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 IGHV1OR15-9A0A0B4J2B8 117 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 A0A1W2PQD8 194 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 UPK3BL1B0FP48 263 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 UPK3BL2E5RIL1 263 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 TRIM24O15164 1050 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 OLFM2O95897 454 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 FTH1P19P0C7X4 201 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 NDUFV2P19404 249 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 FOXK1P85037 733 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 GOLGA8FQ08AF8 430 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 GOLGA8DPQ0D2H9 430 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 BIRC3Q13489 604 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 SCARA5Q6ZMJ2 495 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 TPGS1Q6ZTW0 290 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 TMEM25Q86YD3 366 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 SLC41A1Q8IVJ1 513 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 NAXDQ8IW45 347 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 SCAMP5Q8TAC9 235 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 SETD7Q8WTS6 366 aaKnown RBP11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 BBS2Q9BXC9 721 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 B3GNT5Q9BYG0 378 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 MIR1-1HGQ9H1L0 117 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 SLC6A17Q9H1V8 727 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 CCDC86Q9H6F5 360 aaKnown RBP11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 CAPN10Q9HC96 672 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 KIAA1586Q9HCI6 787 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 GMIPQ9P107 970 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 APOBEC2Q9Y235 224 aaKnown RBP11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 RAD54BQ9Y620 910 aa11.12□□□□□ -0.63
CDC42BPB-207ENST00000560492 PTPRBP23467 1997 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 GOLGA8CPA6NN73 597 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 CLIC2O15247 247 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 HOXC11O43248 304 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 TACC1O75410 805 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 AP1G2O75843 785 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 CST3P01034 146 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 CD59P13987 128 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 MAOBP27338 520 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 SLC5A3P53794 718 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 SNRNP35Q16560 246 aaKnown RBP11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 COL28A1Q2UY09 1125 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 WDR45BQ5MNZ6 344 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 PEAR1Q5VY43 1037 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 RAB44Q7Z6P3 723 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 FAM35AQ86V20 835 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 MIB1Q86YT6 1006 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 ETFBKMTQ8IXQ9 262 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 PLPP6Q8IY26 295 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 KCNV2Q8TDN2 545 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 OVCA2Q8WZ82 227 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 HPS3Q969F9 1004 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 JAKMIP2Q96AA8 810 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 KCNK16Q96T55 309 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 ACOX2Q99424 681 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 CGRRF1Q99675 332 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 DMAP1Q9NPF5 467 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 TMEM30AQ9NV96 361 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 CACNA2D2Q9NY47 1150 aa11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 FBXO2Q9UK22 296 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 SRPRBQ9Y5M8 271 aaKnown RBP11.11□□□□□ -0.63
CDC42BPB-207ENST00000560492 PLXNB3Q9ULL4 1909 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 A0A0A0MRY4 1105 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 TLR5O60602 858 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 TYRP14679 529 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 MYL6P60660 151 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 ASIC1P78348 528 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 GRIK2Q13002 908 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 DSG2Q14126 1118 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 STARD3Q14849 445 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 CCDC157Q569K6 752 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 LIMS2Q7Z4I7 341 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 PDZD3Q86UT5 571 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 CACUL1Q86Y37 369 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 NELFCDQ8IXH7 590 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 PHTF2Q8N3S3 785 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 ZCCHC9Q8N567 271 aaKnown RBP11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 GLIS3Q8NEA6 775 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 MDM1Q8TC05 714 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 PTCD2Q8WV60 388 aaKnown RBP11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 HNRNPLLQ8WVV9 542 aaKnown RBP11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 FOXJ1Q92949 421 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 SYAP1Q96A49 352 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 SMARCD1Q96GM5 515 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 TNIP3Q96KP6 325 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 CD93Q9NPY3 652 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 KRT82Q9NSB4 513 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 DNAAF2Q9NVR5 837 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms