RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ATP11AP98196 1134 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 PDK2Q15119 407 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 DDR2Q16832 855 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 CDO1Q16878 200 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 C15orf59Q2T9L4 293 aaPredicted RBP8.99□□□□□ -0.97
TRAF3-209ENST00000560463 ERMARDQ5T6L9 678 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 BSPRYQ5W0U4 402 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 BTBD8Q5XKL5 378 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 CCDC70Q6NSX1 233 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 RTL10Q7L3V2 364 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 RSRC2Q7L4I2 434 aaKnown RBP8.99□□□□□ -0.97
TRAF3-209ENST00000560463 BHLHA9Q7RTU4 235 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 TMC7Q7Z402 723 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 CPNE8Q86YQ8 564 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 PSTKQ8IV42 348 aaKnown RBP8.99□□□□□ -0.97
TRAF3-209ENST00000560463 MMGT1Q8N4V1 131 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 ZNF276Q8N554 614 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 ARFGAP1Q8N6T3 406 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 SPATA4Q8NEY3 305 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 CMASQ8NFW8 434 aaPredicted RBP8.99□□□□□ -0.97
TRAF3-209ENST00000560463 OVCA2Q8WZ82 227 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 MS4A14Q96JA4 679 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 SEPT5Q99719 369 aaPredicted RBP8.99□□□□□ -0.97
TRAF3-209ENST00000560463 TTLL2Q9BWV7 592 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 EMILIN2Q9BXX0 1053 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 NGRNQ9NPE2 291 aaKnown RBP8.99□□□□□ -0.97
TRAF3-209ENST00000560463 TLR8Q9NR97 1041 aaKnown RBP8.99□□□□□ -0.97
TRAF3-209ENST00000560463 CLIC5Q9NZA1 410 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 MTUS1Q9ULD2 1270 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 SLC27A5Q9Y2P5 690 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 ANKRD36A6QL64 1941 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 MYOFQ9NZM1 2061 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 GOLGA6L10A0A0M3HER8 536 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 LCHNA4D1U4 455 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 ZNF487B1APH4 448 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 M0QYT0 321 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 PDE2AO00408 941 aaPredicted RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 KRIT1O00522 736 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 FSCN2O14926 492 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 ADAM12O43184 909 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 LPXNO60711 386 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 CXCL14O95715 111 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 FYNP06241 537 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 ADH1AP07327 375 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 CSH1P0DML2 217 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 CSH2P0DML3 217 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 TCF4P15884 667 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 KDELR1P24390 212 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 RDXP35241 583 aaKnown RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 ALDH1A3P47895 512 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 PPP3CCP48454 512 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SULT1E1P49888 294 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 CDR1P51861 262 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 RABGGTBP53611 331 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 HDAC4P56524 1084 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 YWHAGP61981 247 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 DEUP1Q05D60 604 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 PLD1Q13393 1074 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SMC1AQ14683 1233 aaKnown RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SHHQ15465 462 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 LONRF2Q1L5Z9 754 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 GLE1Q53GS7 698 aaKnown RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 TFDP3Q5H9I0 405 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 C9orf50Q5SZB4 431 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 ZFYVE27Q5T4F4 411 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 DAB2IPQ5VWQ8 1189 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SYPL2Q5VXT5 272 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 PDE12Q6L8Q7 609 aaKnown RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SCYL2Q6P3W7 929 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 HFE2Q6ZVN8 426 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SND1Q7KZF4 910 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SLC13A5Q86YT5 568 aaPredicted RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 CCDC50Q8IVM0 306 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 MAP7D3Q8IWC1 876 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 PDZD8Q8NEN9 1154 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SCAMP5Q8TAC9 235 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 FAM71BQ8TC56 605 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SPPL3Q8TCT6 385 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 UBXN4Q92575 508 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 TRMT2BQ96GJ1 504 aaKnown RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 SLITRK1Q96PX8 696 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 CDK5RAP1Q96SZ6 601 aaKnown RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 CRISPLD1Q9H336 500 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 ZWILCHQ9H900 591 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 PRDM16Q9HAZ2 1276 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 CYP4F11Q9HBI6 524 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 TLR9Q9NR96 1032 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 HOMER3Q9NSC5 361 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 OLA1Q9NTK5 396 aaKnown RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 PCDH10Q9P2E7 1040 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 PCSK1NQ9UHG2 260 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 ASB3Q9Y575 518 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 CHD9Q3L8U1 2897 aa8.98□□□□□ -0.97
TRAF3-209ENST00000560463 NYNRINQ9P2P1 1898 aaKnown RBP8.98□□□□□ -0.97
TRAF3-209ENST00000560463 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 SLC38A8A6NNN8 435 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 TEX28O15482 410 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 TJP3O95049 919 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 SEC24AO95486 1093 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 KRT1P04264 644 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms