RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 SLC7A14Q8TBB6 771 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 BCL7CQ8WUZ0 217 aaPredicted RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 RUBCNQ92622 972 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 VWCEQ96DN2 955 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 PKMYT1Q99640 499 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 C11orf84Q9BUA3 381 aaPredicted RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 DDX23Q9BUQ8 820 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 MAK16Q9BXY0 300 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 KANSL3Q9P2N6 904 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 ADAM28Q9UKQ2 775 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 MFHAS1Q9Y4C4 1052 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 HEY1Q9Y5J3 304 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 NR2E3Q9Y5X4 410 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 SGK1O00141 431 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 DPYSL4O14531 572 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 HSF2BPO75031 334 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 ALDH2P05091 517 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 ACRP10323 421 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 DAOAP59103 153 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 TSPY1Q01534 308 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 UAP1Q16222 522 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 RSPO2Q6UXX9 243 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 SPATA2LQ8IUW3 424 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 ATAD1Q8NBU5 361 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 MAIP1Q8WWC4 291 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 PIK3R5Q8WYR1 880 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 KCTD13Q8WZ19 329 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 ANLNQ9NQW6 1124 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 PIGVQ9NUD9 493 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 MARCH5Q9NX47 278 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 LCMT1Q9UIC8 334 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 DSEQ9UL01 958 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 FAN1Q9Y2M0 1017 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 SLC27A5Q9Y2P5 690 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 ZBED1O96006 694 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 CHKAP35790 457 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 HSD17B3P37058 310 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 COPS2P61201 443 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 ERMARDQ5T6L9 678 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 ZNF365Q70YC5 407 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 CRIPAKQ8N1N5 446 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 UBE2Q2Q8WVN8 375 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 POPDC2Q9HBU9 364 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 PCDH18Q9HCL0 1135 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 AP4E1Q9UPM8 1137 aa11.34□□□□□ -0.59
SNRPA1-211ENST00000560433 I6L893 689 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 C2CD2LO14523 706 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 CSF2RAP15509 400 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 GOT1P17174 413 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 RPL17P18621 184 aaKnown RBP11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 IVDP26440 423 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 PTPN9P43378 593 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 ARSEP51690 589 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 ITGA8P53708 1063 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 P3H1Q32P28 736 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 SLC25A52Q3SY17 297 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 CTXN3Q4LDR2 81 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 RTP2Q5QGT7 225 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 HP1BP3Q5SSJ5 553 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 PRSS55Q6UWB4 352 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 BHLHA9Q7RTU4 235 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 TMC3Q7Z5M5 1100 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 NPAS4Q8IUM7 802 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 UNC45BQ8IWX7 931 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 PCDH19Q8TAB3 1148 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 SPATA18Q8TC71 538 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 CENPIQ92674 756 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 KCTD15Q96SI1 283 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 ETNK2Q9NVF9 386 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 SNX10Q9Y5X0 201 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 CREB3O43889 395 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 GAS8O95995 478 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 GALTP07902 379 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 L1CAMP32004 1257 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 SLC5A3P53794 718 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 DEUP1Q05D60 604 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 BOLA3Q53S33 107 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 ANKRD20A8PQ5CZ79 823 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 RAB41Q5JT25 222 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 KCTD16Q68DU8 428 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 BBS12Q6ZW61 710 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 PQLC3Q8N755 202 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 RNF157Q96PX1 679 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 UBXN6Q9BZV1 441 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 ELAC1Q9H777 363 aaKnown RBP11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 CSNK1G1Q9HCP0 422 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 DMAP1Q9NPF5 467 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 MTMR10Q9NXD2 777 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 VPS18Q9P253 973 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 PLAAQ9Y263 795 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 NEU2Q9Y3R4 380 aa11.33□□□□□ -0.6
SNRPA1-211ENST00000560433 NLRC5Q86WI3 1866 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 TRIM43BA6NCK2 446 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 DAB1O75553 588 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 ENDOD1O94919 500 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms