RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CDH8P55286 799 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 ENPEPQ07075 957 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 STK4Q13043 487 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 KMT5BQ4FZB7 885 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 BTBD8Q5XKL5 378 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 RHBDF2Q6PJF5 856 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 NUDT18Q6ZVK8 323 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 CYP2U1Q7Z449 544 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 TRMT11Q7Z4G4 463 aaKnown RBP14.34□□□□□ -0.11
SMAD3-214ENST00000560402 GRAMD1CQ8IYS0 662 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 FUKQ8N0W3 1084 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 CRYBG2Q8N1P7 616 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 MDGA1Q8NFP4 955 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 OLIG1Q8TAK6 271 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 KCNV2Q8TDN2 545 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 ERCC4Q92889 916 aaPredicted RBP14.34□□□□□ -0.11
SMAD3-214ENST00000560402 MRFAP1L1Q96HT8 127 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 KCNK16Q96T55 309 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 TPSD1Q9BZJ3 242 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 IMPG2Q9BZV3 1241 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 DNAI2Q9GZS0 605 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 CSNK1G1Q9HCP0 422 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 PNPLA8Q9NP80 782 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 MAN1B1Q9UKM7 699 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 FRMD4BQ9Y2L6 1034 aa14.34□□□□□ -0.11
SMAD3-214ENST00000560402 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
SMAD3-214ENST00000560402 ABCA7Q8IZY2 2146 aa14.33□□□□□ -0.11
SMAD3-214ENST00000560402 DCLK1O15075 740 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 ASS1P00966 412 aaKnown RBP14.33□□□□□ -0.12
SMAD3-214ENST00000560402 CHRM1P11229 460 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-214ENST00000560402 KCNA4P22459 653 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 P2RY2P41231 377 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 PPP1R2P41236 205 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 PIK3CAP42336 1068 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 KIR2DL1P43626 348 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-214ENST00000560402 GOLGA8FQ08AF8 430 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 GOLGA8DPQ0D2H9 430 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 STIM1Q13586 685 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 BYSLQ13895 437 aaKnown RBP14.33□□□□□ -0.12
SMAD3-214ENST00000560402 NFIL3Q16649 462 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 LY6G5CQ5SRR4 150 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 PAQR9Q6ZVX9 377 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 ACOT1Q86TX2 421 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 C12orf40Q86WS4 652 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 DHX40Q8IX18 779 aaKnown RBP14.33□□□□□ -0.12
SMAD3-214ENST00000560402 ETFBKMTQ8IXQ9 262 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 CCDC33Q8N5R6 958 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 ALLCQ8N6M5 410 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 IL17RCQ8NAC3 791 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 TXNDC5Q8NBS9 432 aaKnown RBP14.33□□□□□ -0.12
SMAD3-214ENST00000560402 SCAMP5Q8TAC9 235 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 LSM14BQ9BX40 385 aaKnown RBP14.33□□□□□ -0.12
SMAD3-214ENST00000560402 NACA2Q9H009 215 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 SDCBP2Q9H190 292 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 TLR8Q9NR97 1041 aaKnown RBP14.33□□□□□ -0.12
SMAD3-214ENST00000560402 RXFP3Q9NSD7 469 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 GMIPQ9P107 970 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 ANGPTL2Q9UKU9 493 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 TRAF3IP3Q9Y228 551 aa14.33□□□□□ -0.12
SMAD3-214ENST00000560402 MAP1BP46821 2468 aaKnown RBP14.33□□□□□ -0.12
SMAD3-214ENST00000560402 CHD8Q9HCK8 2581 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 NRDCO43847 1150 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 TLR5O60602 858 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 KLF8O95600 359 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-214ENST00000560402 FAM200BP0CF97 657 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 CCDC130P13994 396 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 ERCC5P28715 1186 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-214ENST00000560402 PMLP29590 882 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 TIE1P35590 1138 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 ASPAP45381 313 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 NDST1P52848 882 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 SHC2P98077 582 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 KDSRQ06136 332 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 INCA1Q0VD86 236 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 MORC3Q14149 939 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 SPDYCQ5MJ68 293 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 DAB2IPQ5VWQ8 1189 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 INTS8Q75QN2 995 aaKnown RBP14.32□□□□□ -0.12
SMAD3-214ENST00000560402 SV2AQ7L0J3 742 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 PHTF2Q8N3S3 785 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 ZMIZ2Q8NF64 920 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 SPATA20Q8TB22 786 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 SLC2A14Q8TDB8 520 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 SMOQ99835 787 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 SMOC1Q9H4F8 434 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 CCSER2Q9H7U1 834 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 SPHK2Q9NRA0 654 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 LSM7Q9UK45 103 aaKnown RBP14.32□□□□□ -0.12
SMAD3-214ENST00000560402 CEP192Q8TEP8 1941 aa14.32□□□□□ -0.12
SMAD3-214ENST00000560402 LNP1A1A4G5 178 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 SGK1O00141 431 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 SCAMP3O14828 347 aaKnown RBP14.31□□□□□ -0.12
SMAD3-214ENST00000560402 KHNYNO15037 678 aaKnown RBP14.31□□□□□ -0.12
SMAD3-214ENST00000560402 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 SLC6A11P48066 632 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 VAMP7P51809 220 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 DLG4P78352 724 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 DPYDQ12882 1025 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 CEP135Q66GS9 1140 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 TCEAL6Q6IPX3 200 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms