RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 FAM3CQ92520 227 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 SHDQ96IW2 340 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 KLF16Q9BXK1 252 aaPredicted RBP8.98□□□□□ -0.97
USP3-217ENST00000560070 KIF9Q9HAQ2 790 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 IFNKQ9P0W0 207 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 SFMBT1Q9UHJ3 866 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 ZMYM5Q9UJ78 669 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 DNMT3LQ9UJW3 386 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 ARHGAP26Q9UNA1 814 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 SIT1Q9Y3P8 196 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 PIAS3Q9Y6X2 628 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 TRIP11Q15643 1979 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 KANSL1LA0AUZ9 987 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 E5RJQ4 531 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 F8VZ95 297 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 GRAP2O75791 330 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 SOX5P35711 763 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 ACADSBP45954 432 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 DAOAP59103 153 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 RNASE9P60153 205 aaKnown RBP8.97□□□□□ -0.97
USP3-217ENST00000560070 NR1I3Q14994 352 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 PON2Q15165 354 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 TAF5Q15542 800 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 ITPRIPL2Q3MIP1 535 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 C2CD6Q53TS8 623 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 ASTLQ6HA08 431 aaPredicted RBP8.97□□□□□ -0.97
USP3-217ENST00000560070 BHLHA9Q7RTU4 235 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 BMP8AQ7Z5Y6 402 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 ADGRG2Q8IZP9 1017 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 NAT16Q8N8M0 369 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 TMEM105Q8N8V8 129 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 OSCP1Q8WVF1 389 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 GOLGA1Q92805 767 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 FAM149B1Q96BN6 582 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 PPP1R13BQ96KQ4 1090 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 ZFRQ96KR1 1074 aaKnown RBP8.97□□□□□ -0.97
USP3-217ENST00000560070 HSFY1Q96LI6 401 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 ERGIC2Q96RQ1 377 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 CPXM1Q96SM3 734 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 FAM83CQ9BQN1 747 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 SLC4A5Q9BY07 1137 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 SYNCQ9H7C4 482 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 LMAN1LQ9HAT1 526 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 FBRSL1Q9HCM7 1045 aaKnown RBP8.97□□□□□ -0.97
USP3-217ENST00000560070 HPS4Q9NQG7 708 aa8.97□□□□□ -0.97
USP3-217ENST00000560070 SEPT11Q9NVA2 429 aaKnown RBP8.97□□□□□ -0.97
USP3-217ENST00000560070 SYNJ2BP-COX16A0A087WUM0 186 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 A0A1B0GTH6 734 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 SPECC1L-ADORA2AF8WAN1 911 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 ARNTLO00327 626 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 TRDMT1O14717 391 aaKnown RBP8.96□□□□□ -0.98
USP3-217ENST00000560070 CAPN9O14815 690 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 PAPSS1O43252 624 aaPredicted RBP8.96□□□□□ -0.98
USP3-217ENST00000560070 TSPAN3O60637 253 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 OLFM2O95897 454 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 LTFP02788 710 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 ERBB2P04626 1255 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 NCAM1P13591 858 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 CHRNB2P17787 502 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 PFKLP17858 780 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 TARSP26639 723 aaKnown RBP8.96□□□□□ -0.98
USP3-217ENST00000560070 SLC6A11P48066 632 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 PSEN1P49768 467 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 GALK1P51570 392 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 STARD6P59095 220 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 PRKCQQ04759 706 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 USP4Q13107 963 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 NR1H3Q13133 447 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 PDGFRLQ15198 375 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 EML3Q32P44 896 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 NAA35Q5VZE5 725 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 CWF19L1Q69YN2 538 aaKnown RBP8.96□□□□□ -0.98
USP3-217ENST00000560070 TXNDC11Q6PKC3 985 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 TPGS1Q6ZTW0 290 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 TADA2BQ86TJ2 420 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 TMEM110Q86TL2 294 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 FMNL3Q8IVF7 1028 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 BBS7Q8IWZ6 715 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 CPA6Q8N4T0 437 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 TMEM35BQ8NCS4 154 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 SLC30A5Q8TAD4 765 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 ADAM32Q8TC27 787 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 DNASE1L2Q92874 299 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 BHMTQ93088 406 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 CHFRQ96EP1 664 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 LHX5Q9H2C1 402 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 C8orf33Q9H7E9 229 aaPredicted RBP8.96□□□□□ -0.98
USP3-217ENST00000560070 ECT2Q9H8V3 914 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 CYLDQ9NQC7 956 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 CNGB3Q9NQW8 809 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 ABCC13Q9NSE7 274 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 RBM12Q9NTZ6 932 aaKnown RBP8.96□□□□□ -0.98
USP3-217ENST00000560070 CLIC5Q9NZA1 410 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 MARCH2Q9P0N8 246 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 COX16Q9P0S2 106 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 STRIP2Q9ULQ0 834 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 NAALADL1Q9UQQ1 740 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 CEP83Q9Y592 693 aa8.96□□□□□ -0.98
USP3-217ENST00000560070 ANK1P16157 1881 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms