RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MTMR3Q13615 1198 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 CDO1Q16878 200 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 DCAF12L1Q5VU92 463 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 PDE12Q6L8Q7 609 aaKnown RBP12.74□□□□□ -0.37
HERC1-205ENST00000559886 BNIPLQ7Z465 357 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 SCD5Q86SK9 330 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 MICAL1Q8TDZ2 1067 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 FAM172AQ8WUF8 416 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 NPY6RQ99463 290 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 ADAM33Q9BZ11 813 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 CARD9Q9H257 536 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 RRN3Q9NYV6 651 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 NAALADL1Q9UQQ1 740 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 MYO9BQ13459 2157 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 CAPN9O14815 690 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 NCAM1P13591 858 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 TFE3P19532 575 aaPredicted RBP12.73□□□□□ -0.37
HERC1-205ENST00000559886 MIPP30301 263 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 IRS1P35568 1242 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 SSR1P43307 286 aaKnown RBP12.73□□□□□ -0.37
HERC1-205ENST00000559886 PGFP49763 221 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 SLC25A11Q02978 314 aaKnown RBP12.73□□□□□ -0.37
HERC1-205ENST00000559886 PPP2R2DQ66LE6 453 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 STRADAQ7RTN6 431 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 POLNQ7Z5Q5 900 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 CREG2Q8IUH2 290 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 TBCBQ99426 244 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 ABCC13Q9NSE7 274 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 FBXW11Q9UKB1 542 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 STAP1Q9ULZ2 295 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 INSL5Q9Y5Q6 135 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 TRANK1O15050 2925 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 LPXNO60711 386 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 ENDOD1O94919 500 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 CSPG5O95196 566 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 C1RP00736 705 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 SPATA31D3P0C874 917 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 HDAC4P56524 1084 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 RWDD2BP57060 319 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 HADHQ16836 314 aaKnown RBP12.73□□□□□ -0.37
HERC1-205ENST00000559886 RAB6CQ53S08 254 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 OTUD1Q5VV17 481 aaPredicted RBP12.73□□□□□ -0.37
HERC1-205ENST00000559886 SPATA31D4Q6ZUB0 917 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 ARHGAP18Q8N392 663 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 EDEM1Q92611 657 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 FBXO32Q969P5 355 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 RAB6CQ9H0N0 254 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 CERS4Q9HA82 394 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 NMUR1Q9HB89 426 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 EHD2Q9NZN4 543 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 USP18Q9UMW8 372 aa12.73□□□□□ -0.37
HERC1-205ENST00000559886 A0A1W2PQH9 124 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 CSH1P0DML2 217 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 CSH2P0DML3 217 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 HMGA1P17096 107 aaKnown RBP12.72□□□□□ -0.37
HERC1-205ENST00000559886 IL1R2P27930 398 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 SULT1E1P49888 294 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 PITX1P78337 314 aaPredicted RBP12.72□□□□□ -0.37
HERC1-205ENST00000559886 TAF10Q12962 218 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 WHAMMP3Q1A5X7 153 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 BTBD8Q5XKL5 378 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 TXNRD3NBQ6F5E7 133 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 KATNAL2Q8IYT4 538 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 MYRFLQ96LU7 910 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 SLC28A3Q9HAS3 691 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 GMIPQ9P107 970 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 CALCOCO1Q9P1Z2 691 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 ANAPC1Q9H1A4 1944 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 CDH23Q9H251 3354 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 TRUB2O95900 331 aaKnown RBP12.72□□□□□ -0.37
HERC1-205ENST00000559886 GLUD1P00367 558 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 KRT7P08729 469 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 PSEN1P49768 467 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 CLCN4P51793 760 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 TWF1Q12792 350 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 CCDC149Q6ZUS6 474 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 CYP4V2Q6ZWL3 525 aaPredicted RBP12.72□□□□□ -0.37
HERC1-205ENST00000559886 KREMEN2Q8NCW0 462 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 PGAP3Q96FM1 320 aaPredicted RBP12.72□□□□□ -0.37
HERC1-205ENST00000559886 PRO3102Q9H379 93 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 TLR8Q9NR97 1041 aaKnown RBP12.72□□□□□ -0.37
HERC1-205ENST00000559886 OSER1Q9NX31 292 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 CLIC5Q9NZA1 410 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 RNF14Q9UBS8 474 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
HERC1-205ENST00000559886 M0QYT0 321 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 ZDHHC11BP0C7U3 371 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 EPHB3P54753 998 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 PLD1Q13393 1074 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 ATP13A4Q4VNC1 1196 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 RASGEF1CQ8N431 466 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 SLC7A14Q8TBB6 771 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 ARNTL2Q8WYA1 636 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 TRMT2BQ96GJ1 504 aaKnown RBP12.71□□□□□ -0.37
HERC1-205ENST00000559886 MS4A14Q96JA4 679 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 CAPZA3Q96KX2 299 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 SLITRK1Q96PX8 696 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 PEBP4Q96S96 227 aa12.71□□□□□ -0.37
HERC1-205ENST00000559886 LMAN2LQ9H0V9 348 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms