RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 SPACA7Q96KW9 195 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 TWNKQ96RR1 684 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 TSG101Q99816 390 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 GOLPH3LQ9H4A5 285 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 APOBEC3GQ9HC16 384 aaKnown RBP12.94□□□□□ -0.34
SPG11-219ENST00000559822 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.94□□□□□ -0.343e-10■■■■■ 57.7
SPG11-219ENST00000559822 HOOK1Q9UJC3 728 aaKnown RBP12.94□□□□□ -0.34
SPG11-219ENST00000559822 TBC1D3BA6NDS4 549 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 CYP26A1O43174 497 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 TULP3O75386 442 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 SMC2O95347 1197 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 CAVIN2O95810 425 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 RALAP11233 206 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 TIE1P35590 1138 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 MCCD1P59942 119 aaPredicted RBP12.93□□□□□ -0.34
SPG11-219ENST00000559822 BECN1Q14457 450 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 CCDC6Q16204 474 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 PMS2CLQ68D20 193 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 CCDC186Q7Z3E2 898 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 C12orf40Q86WS4 652 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 TTC30AQ86WT1 665 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 ETFBKMTQ8IXQ9 262 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 MDGA1Q8NFP4 955 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 JAKMIP2Q96AA8 810 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 XPO6Q96QU8 1125 aaKnown RBP12.93□□□□□ -0.34
SPG11-219ENST00000559822 KLF16Q9BXK1 252 aaPredicted RBP12.93□□□□□ -0.34
SPG11-219ENST00000559822 DUSP16Q9BY84 665 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 TPSD1Q9BZJ3 242 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 RAB20Q9NX57 234 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 BCCIPQ9P287 314 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPG11-219ENST00000559822 WDR35Q9P2L0 1181 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 DNMT3LQ9UJW3 386 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 SDK1Q7Z5N4 2213 aa12.93□□□□□ -0.34
SPG11-219ENST00000559822 BCLAF3A2AJT9 711 aaKnown RBP12.92□□□□□ -0.34
SPG11-219ENST00000559822 HHLA1C9JL84 531 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 SGK1O00141 431 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 DCLK1O15075 740 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 SLC16A3O15427 465 aaKnown RBP12.92□□□□□ -0.34
SPG11-219ENST00000559822 ZBTB24O43167 697 aaPredicted RBP12.92□□□□□ -0.34
SPG11-219ENST00000559822 ADRB1P08588 477 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 KIR2DL1P43626 348 aaPredicted RBP12.92□□□□□ -0.34
SPG11-219ENST00000559822 PLA2G4AP47712 749 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 KIF11P52732 1056 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 COBLL1Q53SF7 1204 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 C10orf120Q5SQS8 335 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 C10orf76Q5T2E6 689 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 STPG1Q5TH74 334 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 GRAMD4Q6IC98 578 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 GPRIN1Q7Z2K8 1008 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 CYP2U1Q7Z449 544 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 TMEM25Q86YD3 366 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 ARHGAP18Q8N392 663 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 PHTF2Q8N3S3 785 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 ZNF276Q8N554 614 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 ZNF513Q8N8E2 541 aaPredicted RBP12.92□□□□□ -0.34
SPG11-219ENST00000559822 NAT16Q8N8M0 369 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 TERB1Q8NA31 727 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 HEXIM2Q96MH2 286 aaKnown RBP12.92□□□□□ -0.34
SPG11-219ENST00000559822 GSDMAQ96QA5 445 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 BBS2Q9BXC9 721 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 GDPD2Q9HCC8 539 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPG11-219ENST00000559822 MARK1Q9P0L2 795 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 NAGPAQ9UK23 515 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 ZNF510Q9Y2H8 683 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 SPTBN2O15020 2390 aa12.92□□□□□ -0.34
SPG11-219ENST00000559822 A0A1W2PQH9 124 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 NEDD8-MDP1E9PL57 170 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 CACNG3O60359 315 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 TBX18O95935 607 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 RARGP13631 454 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 DPP6P42658 865 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 YWHAEP62258 255 aaKnown RBP12.91□□□□□ -0.34
SPG11-219ENST00000559822 NUCB2P80303 420 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 FKBP3Q00688 224 aaKnown RBP12.91□□□□□ -0.34
SPG11-219ENST00000559822 MESP2Q0VG99 397 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 PNOCQ13519 176 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 ZNF394Q53GI3 561 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 SPDYCQ5MJ68 293 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 PPP1R26Q5T8A7 1209 aaPredicted RBP12.91□□□□□ -0.34
SPG11-219ENST00000559822 ZNF658Q5TYW1 1059 aaPredicted RBP12.91□□□□□ -0.34
SPG11-219ENST00000559822 TCERG1LQ5VWI1 586 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 RNF43Q68DV7 783 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 SDE2Q6IQ49 451 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 LPCAT2Q7L5N7 544 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 SMYD4Q8IYR2 804 aaPredicted RBP12.91□□□□□ -0.34
SPG11-219ENST00000559822 PGBD3Q8N328 593 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 OLIG1Q8TAK6 271 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 TMEM176AQ96HP8 235 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 CISHQ9NSE2 258 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 DNAJC17Q9NVM6 304 aaKnown RBP12.91□□□□□ -0.34
SPG11-219ENST00000559822 CLIC5Q9NZA1 410 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 CIZ1Q9ULV3 898 aaPredicted RBP12.91□□□□□ -0.34
SPG11-219ENST00000559822 STARD13Q9Y3M8 1113 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 MYOFQ9NZM1 2061 aa12.91□□□□□ -0.34
SPG11-219ENST00000559822 TCRBV21S2A2A0A5A6 115 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 KHNYNO15037 678 aaKnown RBP12.9□□□□□ -0.34
SPG11-219ENST00000559822 MAP3K13O43283 966 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 ADAM23O75077 832 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms