RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 HSPA1BP0DMV9 641 aaKnown RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 HSD17B3P37058 310 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 ANO4Q32M45 955 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 MAP7D1Q3KQU3 841 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 TRIM60Q495X7 471 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 COBLL1Q53SF7 1204 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 PCGF5Q86SE9 256 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 SEMA4DQ92854 862 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 CFAP57Q96MR6 1250 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 TGS1Q96RS0 853 aaKnown RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 C16orf70Q9BSU1 422 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 APOL5Q9BWW9 433 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 SEZ6LQ9BYH1 1024 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 TELO2Q9Y4R8 837 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 TTLL13PA6NNM8 815 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 F5H5T6 163 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 ATP9BO43861 1147 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 XYLBO75191 536 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 SKAP2O75563 359 aaPredicted RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 DCTN3O75935 186 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 ATP5HO75947 161 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 GJB6O95452 261 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 ZNF865P0CJ78 1059 aaPredicted RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 ESRRAP11474 423 aaPredicted RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 ETFBP38117 255 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 PLD1Q13393 1074 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 PKN2Q16513 984 aaKnown RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 AGBL2Q5U5Z8 902 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 DENND1BQ6P3S1 775 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 DENND5BQ6ZUT9 1274 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 DEFB106AQ8N104 65 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 CCDC33Q8N5R6 958 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 C1orf127Q8N9H9 656 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 EPS8L1Q8TE68 723 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 PCYT2Q99447 389 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 RAB6BQ9NRW1 208 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 DNAJC25-GNG10A0A024R161 153 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 CARNS1A5YM72 827 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 RASA4BC9J798 803 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 RASA4O43374 803 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 SPATA31D3P0C874 917 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 SDHAF4Q5VUM1 108 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 SPATA31D4Q6ZUB0 917 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 PIGZQ86VD9 579 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ZSWIM2Q8NEG5 633 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 CASKIN2Q8WXE0 1202 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 SHC3Q92529 594 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 TRIM51Q9BSJ1 452 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 CDH9Q9ULB4 789 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ARL5CA6NH57 179 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 CLDN5O00501 218 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 CLCNKBP51801 687 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 SESN2P58004 480 aaPredicted RBP11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ZNF268Q14587 947 aaPredicted RBP11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 TSEN34Q9BSV6 310 aaKnown RBP11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 TTPALQ9BTX7 342 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ISCUQ9H1K1 167 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ATG7O95352 703 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ADH1AP07327 375 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 CCND1P24385 295 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 IRX4P78413 519 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 PDK1Q15118 436 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 MORN1Q5T089 497 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 FAM228AQ86W67 206 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 RAPGEF5Q92565 580 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 CYTH2Q99418 400 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 TLK1Q9UKI8 766 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 USP18Q9UMW8 372 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 USP15Q9Y4E8 981 aaPredicted RBP11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ZNF831Q5JPB2 1677 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 SCAMP3O14828 347 aaKnown RBP11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 GYG2O15488 501 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ANP32DO95626 131 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ADSSP30520 456 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 RANBP1P43487 201 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 WDR59Q6PJI9 974 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 SPATA21Q7Z572 469 aa11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 ABTB1Q969K4 478 aaPredicted RBP11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 UBE2OQ9C0C9 1292 aaKnown RBP11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 MRPL42Q9Y6G3 142 aaKnown RBP11.05□□□□□ -0.64
CARMIL3-202ENST00000559694 RREB1Q92766 1687 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 ADGRA3Q8IWK6 1321 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 DOCK2Q92608 1830 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 A0A0G2JND7 137 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 CASQ2O14958 399 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 LTFP02788 710 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 GLI1P08151 1106 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 NPR3P17342 541 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 LAG3P18627 525 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 PAX7P23759 505 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 POU5F1BQ06416 359 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 MTM1Q13496 603 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 PDE1CQ14123 709 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 SPARCL1Q14515 664 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 IZUMO3Q5VZ72 239 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 ATAD1Q8NBU5 361 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 MRPL45Q9BRJ2 306 aaKnown RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 RNF39Q9H2S5 420 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 AP4E1Q9UPM8 1137 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms