RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SMOQ99835 787 aa13.86□□□□□ -0.19
TPM1-220ENST00000559556 NUSAP1Q9BXS6 441 aaKnown RBP13.86□□□□□ -0.19
TPM1-220ENST00000559556 DMAC2Q9NW81 257 aa13.86□□□□□ -0.19
TPM1-220ENST00000559556 DEC1Q9P2X7 70 aa13.86□□□□□ -0.19
TPM1-220ENST00000559556 BPTFQ12830 3046 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 TBC1D3BA6NDS4 549 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 MAP3K13O43283 966 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 CACNG3O60359 315 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 BEST1O76090 585 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 IRF1P10914 325 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 P4HA1P13674 534 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 CCDC130P13994 396 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 AFMP43652 599 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 PGFP49763 221 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 ZACNQ401N2 412 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 LYSMD4Q5XG99 296 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 UNQ6494/PRO21346Q6UXR6 183 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 NUDT18Q6ZVK8 323 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 HTR3DQ70Z44 454 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 ARMCX6Q7L4S7 300 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 TMEM25Q86YD3 366 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 CRYBG2Q8N1P7 616 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 NAT16Q8N8M0 369 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 KIAA0895Q8NCT3 520 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 TAF4BQ92750 862 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 ELMO3Q96BJ8 720 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 KCTD10Q9H3F6 313 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 FBXO44Q9H4M3 255 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 CD248Q9HCU0 757 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 TLR8Q9NR97 1041 aaKnown RBP13.85□□□□□ -0.19
TPM1-220ENST00000559556 TMEM74BQ9NUR3 256 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 FAM13BQ9NYF5 915 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 HMGXB4Q9UGU5 601 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 PILRBQ9UKJ0 227 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 HCN2Q9UL51 889 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 CIZ1Q9ULV3 898 aaPredicted RBP13.85□□□□□ -0.19
TPM1-220ENST00000559556 PCDHA7Q9UN72 937 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 STARD13Q9Y3M8 1113 aa13.85□□□□□ -0.19
TPM1-220ENST00000559556 ARID1BQ8NFD5 2236 aaPredicted RBP13.84□□□□□ -0.19
TPM1-220ENST00000559556 SHROOM3Q8TF72 1996 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 AP5Z1O43299 807 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 GREM1O60565 184 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 CLSTN1O94985 981 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 ASS1P00966 412 aaKnown RBP13.84□□□□□ -0.19
TPM1-220ENST00000559556 PDIA4P13667 645 aaKnown RBP13.84□□□□□ -0.19
TPM1-220ENST00000559556 HOXB2P14652 356 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 ENGP17813 658 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 GABRG2P18507 467 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 ITPKAP23677 461 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 NTSR1P30989 418 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 ME1P48163 572 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 NDST1P52848 882 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 DLG4P78352 724 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 FOXC1Q12948 553 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 SGSM1Q2NKQ1 1148 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 ANO4Q32M45 955 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 C10orf76Q5T2E6 689 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 UNC93AQ86WB7 457 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 GRAMD1CQ8IYS0 662 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 PGBD3Q8N328 593 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 SLC2A14Q8TDB8 520 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 KLF16Q9BXK1 252 aaPredicted RBP13.84□□□□□ -0.19
TPM1-220ENST00000559556 TMEM121BQ9BXQ6 578 aaPredicted RBP13.84□□□□□ -0.19
TPM1-220ENST00000559556 ADAM33Q9BZ11 813 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 CYLDQ9NQC7 956 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 MARK1Q9P0L2 795 aa13.84□□□□□ -0.19
TPM1-220ENST00000559556 ATXN2Q99700 1313 aaKnown RBP13.84□□□□□ -0.19
TPM1-220ENST00000559556 GCN1Q92616 2671 aaKnown RBP13.84□□□□□ -0.19
TPM1-220ENST00000559556 SMG1Q96Q15 3661 aaKnown RBP13.84□□□□□ -0.19
TPM1-220ENST00000559556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.2
TPM1-220ENST00000559556 UPK3BL1B0FP48 263 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 C1QTNF9BB2RNN3 333 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 UPK3BL2E5RIL1 263 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 PDXKO00764 312 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 TRIM24O15164 1050 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 ACTN4O43707 911 aaKnown RBP13.83□□□□□ -0.2
TPM1-220ENST00000559556 F13A1P00488 732 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 RPN1P04843 607 aaKnown RBP13.83□□□□□ -0.2
TPM1-220ENST00000559556 SLFN14P0C7P3 912 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 C1QTNF9P0C862 333 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 ZSCAN22P10073 491 aaPredicted RBP13.83□□□□□ -0.2
TPM1-220ENST00000559556 ASPAP45381 313 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 MAP3K7CLP57077 242 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 INCA1Q0VD86 236 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 STK4Q13043 487 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 ORC1Q13415 861 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 UAP1L1Q3KQV9 507 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 EGFLAMQ63HQ2 1017 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 ATL3Q6DD88 541 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 GRAMD4Q6IC98 578 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 SLC36A4Q6YBV0 504 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 CLEC20AQ6ZU45 233 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 GPRIN1Q7Z2K8 1008 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 MIB1Q86YT6 1006 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 CEP57L1Q8IYX8 460 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 C12orf29Q8N999 325 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 TMC2Q8TDI7 906 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 NACA2Q9H009 215 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms