RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 BSPRYQ5W0U4 402 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 ALKBH5Q6P6C2 394 aaKnown RBP13.03□□□□□ -0.32
GABPB1-208ENST00000558970 MON1BQ7L1V2 547 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 MON1AQ86VX9 555 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 ZSCAN18Q8TBC5 510 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-208ENST00000558970 ZNF653Q96CK0 615 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 BAG1Q99933 345 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-208ENST00000558970 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 PACSIN1Q9BY11 444 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 COMMD8Q9NX08 183 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 COX16Q9P0S2 106 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 RASAL2Q9UJF2 1139 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 CDH7Q9ULB5 785 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 FAM92AA1XBS5 289 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 CAPN9O14815 690 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 COCHO43405 550 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 TLR5O60602 858 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 RTN2O75298 545 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 CALB1P05937 261 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 HMBSP08397 361 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 RALAP11233 206 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 NCAM1P13591 858 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 AVPR1AP37288 418 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 GABRB2P47870 512 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 RPL34P49207 117 aaKnown RBP13.02□□□□□ -0.33
GABPB1-208ENST00000558970 GSDMDP57764 484 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 SNX16P57768 344 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 SLC6A3Q01959 620 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-208ENST00000558970 HECTD3Q5T447 861 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 PM20D1Q6GTS8 502 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 OLFML1Q6UWY5 402 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 TOGARAM2Q6ZUX3 1019 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 PHF13Q86YI8 300 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-208ENST00000558970 MIB1Q86YT6 1006 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 MCOLN2Q8IZK6 566 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 EMC1Q8N766 993 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 TDRD5Q8NAT2 981 aaKnown RBP13.02□□□□□ -0.33
GABPB1-208ENST00000558970 ADAM32Q8TC27 787 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 RNF139Q8WU17 664 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 OVCA2Q8WZ82 227 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 ACSF2Q96CM8 615 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-208ENST00000558970 KXD1Q9BQD3 176 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 PHF7Q9BWX1 381 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-208ENST00000558970 RNF38Q9H0F5 515 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 TASP1Q9H6P5 420 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 CYLDQ9NQC7 956 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 AVENQ9NQS1 362 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-208ENST00000558970 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.02□□□□□ -0.33
GABPB1-208ENST00000558970 SFMBT1Q9UHJ3 866 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 NAALADL1Q9UQQ1 740 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 FAM50BQ9Y247 325 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 CCL26Q9Y258 94 aa13.02□□□□□ -0.33
GABPB1-208ENST00000558970 TRAV19A0A0A6YYK7 116 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 SSU72P8A0A1W2PR75 194 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 MSI1O43347 362 aaKnown RBP13.01□□□□□ -0.33
GABPB1-208ENST00000558970 PRAMEF12O95522 483 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 ZDHHC11BP0C7U3 371 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 HDCP19113 662 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 RRM1P23921 792 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-208ENST00000558970 VIPR2P41587 438 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
GABPB1-208ENST00000558970 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 SLC18A3Q16572 532 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 ASTE1Q2TB18 679 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-208ENST00000558970 PUS10Q3MIT2 529 aaKnown RBP13.01□□□□□ -0.33
GABPB1-208ENST00000558970 FAM78AQ5JUQ0 283 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 SYPL2Q5VXT5 272 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 DNAJC24Q6P3W2 148 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 RAD9BQ6WBX8 426 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 OTOP3Q7RTS5 596 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 TMEM139Q8IV31 216 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 ARID3BQ8IVW6 561 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-208ENST00000558970 CMTM8Q8IZV2 173 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 DEFB106AQ8N104 65 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 ARHGAP18Q8N392 663 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 JOSD2Q8TAC2 188 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 RSAD2Q8WXG1 361 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 IRGQQ8WZA9 623 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 MCEEQ96PE7 176 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 SELENOOQ9BVL4 669 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 THAP2Q9H0W7 228 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 ABCC13Q9NSE7 274 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.01□□□□□ -0.337e-6■■■■□ 20.5
GABPB1-208ENST00000558970 CNOT8Q9UFF9 292 aaKnown RBP13.01□□□□□ -0.33
GABPB1-208ENST00000558970 RAPGEFL1Q9UHV5 662 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 STRIP2Q9ULQ0 834 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 TFR2Q9UP52 801 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 NR2E1Q9Y466 385 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 CPQQ9Y646 472 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 TICRRQ7Z2Z1 1910 aa13.01□□□□□ -0.33
GABPB1-208ENST00000558970 NCANO14594 1321 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 ZNF263O14978 683 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 SART1O43290 800 aaKnown RBP13□□□□□ -0.33
GABPB1-208ENST00000558970 HSF2BPO75031 334 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 OAS1P00973 400 aaKnown RBP13□□□□□ -0.33
GABPB1-208ENST00000558970 FYNP06241 537 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 GZMAP12544 262 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 LAMP2P13473 410 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms