RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 DPYSL3Q14195 570 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 BTG3Q14201 252 aaPredicted RBP13.52□□□□□ -0.24
SMAD3-207ENST00000558763 PPP1R7Q15435 360 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 ZFYVE27Q5T4F4 411 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 UBAP2Q5T6F2 1119 aaKnown RBP13.52□□□□□ -0.24
SMAD3-207ENST00000558763 FAM171BQ6P995 826 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 GPRIN1Q7Z2K8 1008 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 PRUNE1Q86TP1 453 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 OR10T2Q8NGX3 314 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 GRK7Q8WTQ7 553 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 HSPH1Q92598 858 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 LRRC45Q96CN5 670 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 ZNF689Q96CS4 500 aaPredicted RBP13.52□□□□□ -0.24
SMAD3-207ENST00000558763 UROC1Q96N76 676 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.24
SMAD3-207ENST00000558763 MTIF3Q9H2K0 278 aaKnown RBP13.52□□□□□ -0.24
SMAD3-207ENST00000558763 NRDE2Q9H7Z3 1164 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 RC3H2Q9HBD1 1191 aaKnown RBP13.52□□□□□ -0.24
SMAD3-207ENST00000558763 NGRNQ9NPE2 291 aaKnown RBP13.52□□□□□ -0.24
SMAD3-207ENST00000558763 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.52□□□□□ -0.24
SMAD3-207ENST00000558763 WHRNQ9P202 907 aa13.52□□□□□ -0.24
SMAD3-207ENST00000558763 SAE1Q9UBE0 346 aaPredicted RBP13.52□□□□□ -0.24
SMAD3-207ENST00000558763 CST8O60676 142 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 GAS8O95995 478 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 ODC1P11926 461 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 NDUFV1P49821 464 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 SNX16P57768 344 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 FAM193AP78312 1265 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 MMRN1Q13201 1228 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 TRIP13Q15645 432 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-207ENST00000558763 CA9Q16790 459 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 RAB41Q5JT25 222 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 CFAP58Q5T655 872 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 BHLHA9Q7RTU4 235 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 HERC6Q8IVU3 1022 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 ALLCQ8N6M5 410 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 ACTL9Q8TC94 416 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 TEKT4Q8WW24 435 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 NT5C3BQ969T7 300 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 HAUS1Q96CS2 278 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 SUSD3Q96L08 255 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 SLC9A7Q96T83 725 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 SNRNP25Q9BV90 132 aaKnown RBP13.52□□□□□ -0.25
SMAD3-207ENST00000558763 RHOBTB2Q9BYZ6 727 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 FAM129AQ9BZQ8 928 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 DNAI2Q9GZS0 605 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 TMLHEQ9NVH6 421 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 GPATCH2LQ9NWQ4 482 aa13.52□□□□□ -0.25
SMAD3-207ENST00000558763 MDM4O15151 490 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 KRT14P02533 472 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 FAM200BP0CF97 657 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 PECAM1P16284 738 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 MAP3K7CLP57077 242 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 PITX1P78337 314 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 MRPS5P82675 430 aaKnown RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 GABPB1Q06547 395 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 SHHQ15465 462 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 TTMPQ5BVD1 217 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 ZC3H12AQ5D1E8 599 aaKnown RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 SPOUT1Q5T280 376 aaKnown RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 ARL8AQ96BM9 186 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 CCDC114Q96M63 670 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 TMEM209Q96SK2 561 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 KCNK16Q96T55 309 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 TBCBQ99426 244 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 UBE2OQ9C0C9 1292 aaKnown RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 LRRC4CQ9HCJ2 640 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 CSNK1G1Q9HCP0 422 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 FEZ2Q9UHY8 353 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 PLAAQ9Y263 795 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 DRG1Q9Y295 367 aaKnown RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 NT5C1B-RDH14C9J2C7 533 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 NRP1O14786 923 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 PRPSAP2O60256 369 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 HSF2BPO75031 334 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 DAB1O75553 588 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 AP1G2O75843 785 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 FYNP06241 537 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 ITGAVP06756 1048 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 PCSK1P29120 753 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 SLC11A1P49279 550 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 CDH6P55285 790 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 DYNLT1P63172 113 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 INTS6LQ5JSJ4 861 aaKnown RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 SPDYCQ5MJ68 293 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 DCLRE1AQ6PJP8 1040 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 HFE2Q6ZVN8 426 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 LRRTM3Q86VH5 581 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 KCTD6Q8NC69 237 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 MYLPFQ96A32 169 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 FAF2Q96CS3 445 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 SNF8Q96H20 258 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 SLC2A13Q96QE2 648 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 ACBD6Q9BR61 282 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 PCDH18Q9HCL0 1135 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 MTMR10Q9NXD2 777 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 ASIC3Q9UHC3 531 aa13.51□□□□□ -0.25
SMAD3-207ENST00000558763 MRPL42Q9Y6G3 142 aaKnown RBP13.51□□□□□ -0.25
SMAD3-207ENST00000558763 TMEM189-UBE2V1I3L0A0 370 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms