RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CACNA2D1P54289 1103 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 DMC1Q14565 340 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 SGSM1Q2NKQ1 1148 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 NAIF1Q69YI7 327 aaPredicted RBP8.54□□□□□ -1.04
TRAF3-205ENST00000558700 THSD4Q6ZMP0 1018 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 PRR23CQ6ZRP0 262 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 INTS8Q75QN2 995 aaKnown RBP8.54□□□□□ -1.04
TRAF3-205ENST00000558700 SYT13Q7L8C5 426 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 FILIP1Q7Z7B0 1213 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 UNC93AQ86WB7 457 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 NUP93Q8N1F7 819 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 LOXL4Q96JB6 756 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 RTKNQ9BST9 563 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 DNAI2Q9GZS0 605 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 IGSF5Q9NSI5 407 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 SEMA4GQ9NTN9 838 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 TMEM30AQ9NV96 361 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 COMMD8Q9NX08 183 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 SMPD4Q9NXE4 827 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 CFAP97Q9P2B7 532 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 TBC1D14Q9P2M4 693 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 TRAF3IP3Q9Y228 551 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 DMDP11532 3685 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 MED19A0JLT2 244 aaPredicted RBP8.53□□□□□ -1.04
TRAF3-205ENST00000558700 ESPNB1AK53 854 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.53□□□□□ -1.04
TRAF3-205ENST00000558700 IKBKBO14920 756 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 AXIN1O15169 862 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 COCHO43405 550 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 EPN2O95208 641 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 HLA-DRAP01903 254 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 FAM200BP0CF97 657 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 ADH5P11766 374 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 CCDC130P13994 396 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 TGM1P22735 817 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 RPL13P26373 211 aaKnown RBP8.53□□□□□ -1.04
TRAF3-205ENST00000558700 OPRD1P41143 372 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 EIF2DP41214 584 aaKnown RBP8.53□□□□□ -1.04
TRAF3-205ENST00000558700 ASPAP45381 313 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 PXNP49023 591 aaPredicted RBP8.53□□□□□ -1.04
TRAF3-205ENST00000558700 VAMP7P51809 220 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 NDUFA8P51970 172 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 NDST1P52848 882 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 CDH8P55286 799 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 DLG4P78352 724 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 ENPEPQ07075 957 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 ELF2Q15723 593 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 CSRP2Q16527 193 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 NFIL3Q16649 462 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 HECTD3Q5T447 861 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 KRBA2Q6ZNG9 492 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 SV2AQ7L0J3 742 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 CACNA2D4Q7Z3S7 1137 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 ACOT1Q86TX2 421 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 FAM186BQ8IYM0 893 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 FUKQ8N0W3 1084 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 GUF1Q8N442 669 aaKnown RBP8.53□□□□□ -1.04
TRAF3-205ENST00000558700 CCDC150Q8NCX0 1101 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 TSTD1Q8NFU3 115 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 OTUB2Q96DC9 234 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 NIF3L1Q9GZT8 377 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 NACA2Q9H009 215 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 SDCBP2Q9H190 292 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 FBRSL1Q9HCM7 1045 aaKnown RBP8.53□□□□□ -1.04
TRAF3-205ENST00000558700 FAM49BQ9NUQ9 324 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 HMGXB4Q9UGU5 601 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 SH3BP1Q9Y3L3 701 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.53□□□□□ -1.04
TRAF3-205ENST00000558700 DCHS1Q96JQ0 3298 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 ATG2BQ96BY7 2078 aa8.53□□□□□ -1.04
TRAF3-205ENST00000558700 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-205ENST00000558700 E2F8A0AVK6 867 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 FAM92AA1XBS5 289 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 APODP05090 189 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 TRIM49P0CI25 452 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 TRIM49CP0CI26 452 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 ADORA2BP29275 332 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 PSMC2P35998 433 aaKnown RBP8.52□□□□□ -1.05
TRAF3-205ENST00000558700 RAB15P59190 212 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 ZXDBP98169 803 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 GOLGA8FQ08AF8 430 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 GOLGA8DPQ0D2H9 430 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 INCA1Q0VD86 236 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 ORC1Q13415 861 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 DHCR24Q15392 516 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 HSF5Q4G112 596 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-205ENST00000558700 PREPLQ4J6C6 727 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-205ENST00000558700 AASDHQ4L235 1098 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-205ENST00000558700 SNX30Q5VWJ9 437 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 SPOPLQ6IQ16 392 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 C11orf74Q86VG3 221 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 C12orf50Q8NA57 414 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-205ENST00000558700 TSEN2Q8NCE0 465 aaKnown RBP8.52□□□□□ -1.05
TRAF3-205ENST00000558700 SLC2A14Q8TDB8 520 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 USP33Q8TEY7 942 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 EZH1Q92800 747 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-205ENST00000558700 KCNK16Q96T55 309 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 DUSP9Q99956 384 aaKnown RBP8.52□□□□□ -1.05
TRAF3-205ENST00000558700 RNF38Q9H0F5 515 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms