RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 PAPD7Q5XG87 772 aaKnown RBP15.56■□□□□ 0.08
VPS18-202ENST00000558474 BTBD8Q5XKL5 378 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 BNIPLQ7Z465 357 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 TADA2BQ86TJ2 420 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 DEFB106AQ8N104 65 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 EMC1Q8N766 993 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 UBL4BQ8N7F7 174 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 SLC7A14Q8TBB6 771 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 CD101Q93033 1021 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 BTBD6Q96KE9 485 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 NPY6RQ99463 290 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 TRIM7Q9C029 511 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 CERS4Q9HA82 394 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 ZDHHC7Q9NXF8 308 aa15.56■□□□□ 0.08
VPS18-202ENST00000558474 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.56■□□□□ 0.08
VPS18-202ENST00000558474 CES2O00748 559 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 PSTPIP1O43586 416 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 GRAP2O75791 330 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 ZMYND10O75800 440 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 FYNP06241 537 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 RALAP11233 206 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 NCAM1P13591 858 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 HMGA1P17096 107 aaKnown RBP15.55■□□□□ 0.08
VPS18-202ENST00000558474 GBP1P32455 592 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 CTNNA1P35221 906 aaKnown RBP15.55■□□□□ 0.08
VPS18-202ENST00000558474 TUBP50607 506 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 AIF1P55008 147 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 USP46P62068 366 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 TAF10Q12962 218 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 RPS6KA1Q15418 735 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 HADHQ16836 314 aaKnown RBP15.55■□□□□ 0.08
VPS18-202ENST00000558474 PABPC1LQ4VXU2 614 aaKnown RBP15.55■□□□□ 0.08
VPS18-202ENST00000558474 DCAF6Q58WW2 860 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 PPM1LQ5SGD2 360 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 TRNP1Q6NT89 227 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 CC2D1AQ6P1N0 951 aaPredicted RBP15.55■□□□□ 0.08
VPS18-202ENST00000558474 MSANTD2Q6P1R3 559 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 POLNQ7Z5Q5 900 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 DNAJB7Q7Z6W7 309 aaPredicted RBP15.55■□□□□ 0.08
VPS18-202ENST00000558474 RHOT1Q8IXI2 618 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 LEMD2Q8NC56 503 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 GIPC2Q8TF65 315 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 GDPD5Q8WTR4 605 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 ZNF512Q96ME7 567 aaPredicted RBP15.55■□□□□ 0.08
VPS18-202ENST00000558474 TLR10Q9BXR5 811 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 ZNF576Q9H609 170 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 TLE6Q9H808 572 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 PCDHA3Q9Y5H8 950 aa15.55■□□□□ 0.08
VPS18-202ENST00000558474 FTCDO95954 541 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 KRT7P08729 469 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 PFKLP17858 780 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 TCP1P17987 556 aaKnown RBP15.54■□□□□ 0.08
VPS18-202ENST00000558474 IFRD2Q12894 506 aaPredicted RBP15.54■□□□□ 0.08
VPS18-202ENST00000558474 NNTQ13423 1086 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 DNTTIP2Q5QJE6 756 aaKnown RBP15.54■□□□□ 0.08
VPS18-202ENST00000558474 KLHDC10Q6PID8 442 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 HFE2Q6ZVN8 426 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 SCD5Q86SK9 330 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 STKLD1Q8NE28 680 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 RNF139Q8WU17 664 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 NDRG1Q92597 394 aaKnown RBP15.54■□□□□ 0.08
VPS18-202ENST00000558474 CFAP57Q96MR6 1250 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 TBCBQ99426 244 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 MAN1C1Q9NR34 630 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 TRPM5Q9NZQ8 1165 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 HYOU1Q9Y4L1 999 aa15.54■□□□□ 0.08
VPS18-202ENST00000558474 A0A1W2PQH9 124 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 EPOPA6NHQ4 379 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 SOBPA7XYQ1 873 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 TMEM110-MUSTN1A8MSY1 372 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 XYLBO75191 536 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 LRCH4O75427 683 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 ATP1A1P05023 1023 aaKnown RBP15.53■□□□□ 0.08
VPS18-202ENST00000558474 RDXP35241 583 aaKnown RBP15.53■□□□□ 0.08
VPS18-202ENST00000558474 MTA1Q13330 715 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 MTMR3Q13615 1198 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 KCNC3Q14003 757 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 BOLA3Q53S33 107 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 TMEM184AQ6ZMB5 413 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 PSTKQ8IV42 348 aaKnown RBP15.53■□□□□ 0.08
VPS18-202ENST00000558474 GPR152Q8TDT2 470 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 FAM172AQ8WUF8 416 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 PBKQ96KB5 322 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 CARD9Q9H257 536 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 SMOC2Q9H3U7 446 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 NSUN3Q9H649 340 aaKnown RBP15.53■□□□□ 0.08
VPS18-202ENST00000558474 DZANK1Q9NVP4 752 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.53■□□□□ 0.08
VPS18-202ENST00000558474 DDX56Q9NY93 547 aaKnown RBP15.53■□□□□ 0.08
VPS18-202ENST00000558474 GMIPQ9P107 970 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 SNX12Q9UMY4 172 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 MAGED2Q9UNF1 606 aaPredicted RBP15.53■□□□□ 0.08
VPS18-202ENST00000558474 NAALADL1Q9UQQ1 740 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 HCFC2Q9Y5Z7 792 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 SAR1BQ9Y6B6 198 aa15.53■□□□□ 0.08
VPS18-202ENST00000558474 DDX3YO15523 660 aaKnown RBP15.52■□□□□ 0.08
VPS18-202ENST00000558474 IGLV3-25P01717 112 aa15.52■□□□□ 0.08
VPS18-202ENST00000558474 SPATA31D3P0C874 917 aa15.52■□□□□ 0.08
VPS18-202ENST00000558474 SRGAP2BP0DMP2 458 aa15.52■□□□□ 0.08
VPS18-202ENST00000558474 PTPN2P17706 415 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms