RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 KRBA1A5PL33 1030 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 PAPSS1O43252 624 aaPredicted RBP13.1□□□□□ -0.31
LRRC28-206ENST00000558471 GPR37L1O60883 481 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 FBXO21O94952 628 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 PDGFBP01127 241 aaPredicted RBP13.1□□□□□ -0.31
LRRC28-206ENST00000558471 CDH5P33151 784 aaPredicted RBP13.1□□□□□ -0.31
LRRC28-206ENST00000558471 CDR2Q01850 454 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 BTBD8Q5XKL5 378 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 TRIM68Q6AZZ1 485 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 CC2D1AQ6P1N0 951 aaPredicted RBP13.1□□□□□ -0.31
LRRC28-206ENST00000558471 KLHDC10Q6PID8 442 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 IRF2BP2Q7Z5L9 587 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 GAS2L3Q86XJ1 694 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 ZNF677Q86XU0 584 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 SIX5Q8N196 739 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 TMEM35BQ8NCS4 154 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 EDEM1Q92611 657 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 DNASE1L2Q92874 299 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 WBP2Q969T9 261 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 PPP1R13BQ96KQ4 1090 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 C1QTNF1Q9BXJ1 281 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 EDEM3Q9BZQ6 932 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 RBSNQ9H1K0 784 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 LINC00597Q9H2U6 94 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 TRPV5Q9NQA5 729 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 HEBP1Q9NRV9 189 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 GTSE1Q9NYZ3 720 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 CFAP97Q9P2B7 532 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 DNMT3LQ9UJW3 386 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
LRRC28-206ENST00000558471 FAM170AA1A519 330 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 SCAMP3O14828 347 aaKnown RBP13.09□□□□□ -0.31
LRRC28-206ENST00000558471 LTFP02788 710 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 FYNP06241 537 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 FERP16591 822 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 FMO1Q01740 532 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 TNK2Q07912 1038 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 EFEMP1Q12805 493 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 PTPN20Q4JDL3 420 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 RSRC2Q7L4I2 434 aaKnown RBP13.09□□□□□ -0.31
LRRC28-206ENST00000558471 TADA2BQ86TJ2 420 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 TTC8Q8TAM2 541 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 OSCP1Q8WVF1 389 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 PBXIP1Q96AQ6 731 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 NOX5Q96PH1 765 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 CDK5RAP1Q96SZ6 601 aaKnown RBP13.09□□□□□ -0.31
LRRC28-206ENST00000558471 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 EBF3Q9H4W6 596 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 HPS4Q9NQG7 708 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 ARHGEF3Q9NR81 526 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 ABCC13Q9NSE7 274 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 DUS2Q9NX74 493 aaKnown RBP13.09□□□□□ -0.31
LRRC28-206ENST00000558471 WNT6Q9Y6F9 365 aa13.09□□□□□ -0.31
LRRC28-206ENST00000558471 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-206ENST00000558471 SHISA7A6NL88 538 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 CBFA2T2O43439 604 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 LSM8O95777 96 aaKnown RBP13.08□□□□□ -0.32
LRRC28-206ENST00000558471 ERBB2P04626 1255 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 CYP1A1P04798 512 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-206ENST00000558471 IRF1P10914 325 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 ARSAP15289 507 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 IFNAR2P48551 515 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 STARD6P59095 220 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 NOMO3P69849 1222 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 RUNX3Q13761 415 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 MLF2Q15773 248 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-206ENST00000558471 EML3Q32P44 896 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 TMEM31Q5JXX7 168 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 E4F1Q66K89 784 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-206ENST00000558471 BMP8AQ7Z5Y6 402 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 ERICH1Q86X53 443 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 DDX42Q86XP3 938 aaKnown RBP eCLIP13.08□□□□□ -0.32
LRRC28-206ENST00000558471 MIB1Q86YT6 1006 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 CSGALNACT1Q8TDX6 532 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 RNF139Q8WU17 664 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 CPLX3Q8WVH0 158 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 CPA5Q8WXQ8 436 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 FAM149B1Q96BN6 582 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 PIWIL1Q96J94 861 aaKnown RBP13.08□□□□□ -0.32
LRRC28-206ENST00000558471 PCDHB18PQ96TA0 734 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 AGPAT1Q99943 283 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 AIPL1Q9NZN9 384 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 SFMBT1Q9UHJ3 866 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 RASAL2Q9UJF2 1139 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 SH3BP1Q9Y3L3 701 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 F5P12259 2224 aa13.08□□□□□ -0.32
LRRC28-206ENST00000558471 A0A1W2PQJ5 194 aa13.07□□□□□ -0.32
LRRC28-206ENST00000558471 E2F8A0AVK6 867 aa13.07□□□□□ -0.32
LRRC28-206ENST00000558471 PRR33A8MZF0 331 aa13.07□□□□□ -0.32
LRRC28-206ENST00000558471 SART1O43290 800 aaKnown RBP13.07□□□□□ -0.32
LRRC28-206ENST00000558471 AP5Z1O43299 807 aa13.07□□□□□ -0.32
LRRC28-206ENST00000558471 GREM1O60565 184 aa13.07□□□□□ -0.32
LRRC28-206ENST00000558471 TPM3P06753 285 aa13.07□□□□□ -0.32
LRRC28-206ENST00000558471 CCDC172P0C7W6 258 aa13.07□□□□□ -0.32
LRRC28-206ENST00000558471 UNGP13051 313 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms