RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ABCB6Q9NP58 842 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 UXTQ9UBK9 157 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 TNRC6BQ9UPQ9 1833 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 MFAP3LO75121 409 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 IL18RAPO95256 599 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 AFPP02771 609 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 ITGB3P05106 788 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 CKMP06732 381 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 SEC13P55735 322 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 IRX4P78413 519 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 TFAMQ00059 246 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 SNRNP35Q16560 246 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 CBWD6Q4V339 395 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 USP39Q53GS9 565 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 C2orf27AQ580R0 203 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 CBWD3Q5JTY5 395 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 CBWD5Q5RIA9 395 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 C1orf220Q5T0J3 134 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 DAB2IPQ5VWQ8 1189 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 RASSF3Q86WH2 238 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 NT5DC4Q86YG4 428 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 SFTPA1Q8IWL2 248 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 CCDC33Q8N5R6 958 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 EXOC4Q96A65 974 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 BAG1Q99933 345 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 TTYH3Q9C0H2 523 aa11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.86□□□□□ -0.51
RABGGTA-204ENST00000558376 USP27XA6NNY8 438 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 ATP2C2O75185 946 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 CHRM1P11229 460 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 PNPLA4P41247 253 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 PPP3CAQ08209 521 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 ANO7Q6IWH7 933 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 SCN4BQ8IWT1 228 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 C12orf56Q8IXR9 622 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 ELMO3Q96BJ8 720 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 HVCN1Q96D96 273 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 CHP1Q99653 195 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 NLRC4Q9NPP4 1024 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 TMEM9BQ9NQ34 198 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 TRMT1Q9NXH9 659 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 CAPN11Q9UMQ6 739 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 LUC7L2Q9Y383 392 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 CEP192Q8TEP8 1941 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 ADAMTS9Q9P2N4 1935 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 SPEGQ15772 3267 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 SOWAHDA6NJG2 315 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 GABRDO14764 452 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 HUS1O60921 280 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 TCF3P15923 654 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 HDCP19113 662 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 CSRP1P21291 193 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 PON1P27169 355 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 ABCD1P33897 745 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 GCLMP48507 274 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 VAMP7P51809 220 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 MYL7Q01449 175 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 MESP2Q0VG99 397 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 NR1H3Q13133 447 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 DPY19L2P1Q6NXN4 242 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 FAM171BQ6P995 826 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 GJB7Q6PEY0 223 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 TMEM92Q6UXU6 159 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 CYP2U1Q7Z449 544 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 BRSK2Q8IWQ3 736 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 TMEM86AQ8N2M4 240 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 ABHD10Q9NUJ1 306 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 GDAP2Q9NXN4 497 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 CGNQ9P2M7 1197 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 SIX4Q9UIU6 781 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 ARHGAP26Q9UNA1 814 aa11.85□□□□□ -0.51
RABGGTA-204ENST00000558376 DSPP15924 2871 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 CEACAM1P13688 526 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 SLC6A11P48066 632 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 FMO5P49326 533 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 DHPSP49366 369 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 SNRPFP62306 86 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 SOWAHAQ2M3V2 549 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 UAP1L1Q3KQV9 507 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 CFAP221Q4G0U5 840 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 WDR59Q6PJI9 974 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 SPATA2LQ8IUW3 424 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 FRMD1Q8N878 549 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 DEFB124Q8NES8 71 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 MDGA1Q8NFP4 955 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 OLIG1Q8TAK6 271 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 TMEM174Q8WUU8 243 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 RLN3Q8WXF3 142 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 PIGKQ92643 395 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 GATA6Q92908 595 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 PANX2Q96RD6 677 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 MMP17Q9ULZ9 603 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 SNX9Q9Y5X1 595 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 ASPMQ8IZT6 3477 aa11.84□□□□□ -0.51
RABGGTA-204ENST00000558376 LEFTY2O00292 366 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 TPM1P09493 284 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 DLATP10515 647 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms