RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 NDOR1Q9UHB4 597 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 SPATA31A3Q5VYP0 1347 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 PLEKHG1Q9ULL1 1385 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 EFNA5P52803 228 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 DENND1BQ6P3S1 775 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 COMMD2Q86X83 199 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 NACC2Q96BF6 587 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 RXFP1Q9HBX9 757 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 ERVK-7P63135 1459 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 TPD52L2O43399 206 aaKnown RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 RBP3P10745 1247 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 AKAP5P24588 427 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 PTPN4P29074 926 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 ZNF618Q5T7W0 954 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 TAF2Q6P1X5 1199 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 TPCN2Q8NHX9 752 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 NUDT12Q9BQG2 462 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 DGCR6LQ9BY27 220 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 PABPC3Q9H361 631 aaKnown RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 CTNNAL1Q9UBT7 734 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 EIF3LQ9Y262 564 aaKnown RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 TSPAN9O75954 239 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 USP11P51784 963 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 LRRC74BQ6ZQY2 392 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 EDEM1Q92611 657 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 CELF6Q96J87 481 aaKnown RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 KLHL3Q9UH77 587 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 RRN3P2A6NIE6 340 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 CLK2P49760 499 aaKnown RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 SERPINH1P50454 418 aaKnown RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 SRP54P61011 504 aaKnown RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 VAC14Q08AM6 782 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 ZNF177Q13360 481 aaPredicted RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 POLD3Q15054 466 aaPredicted RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 ARHGAP15Q53QZ3 475 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 EPHX4Q8IUS5 362 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 KCNH7Q9NS40 1196 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 ADAM30Q9UKF2 790 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 CBX4O00257 560 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 SLC16A3O15427 465 aaKnown RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 CKMP06732 381 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 ACADMP11310 421 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 TGM2P21980 687 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 PTGER2P43116 358 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 PUDPQ08623 228 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 FAM83EQ2M2I3 478 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 XKR3Q5GH77 459 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 NEK10Q6ZWH5 1172 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 HNRNPLLQ8WVV9 542 aaKnown RBP14.37□□□□□ -0.11
SPG11-210ENST00000558319 PPP2R3CQ969Q6 453 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 RUSC1Q9BVN2 902 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 TMEM165Q9HC07 324 aa14.37□□□□□ -0.11
SPG11-210ENST00000558319 RGL2O15211 777 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 SLC37A4O43826 429 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 CCT8P50990 548 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 SNX17Q15036 470 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 RIPOR1Q6ZS17 1223 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 PTAR1Q7Z6K3 402 aaPredicted RBP14.36□□□□□ -0.11
SPG11-210ENST00000558319 FBXO32Q969P5 355 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ZNF333Q96JL9 665 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 MTA3Q9BTC8 594 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 CATSPERBQ9H7T0 1116 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 EPB41L4AQ9HCS5 686 aaPredicted RBP14.36□□□□□ -0.11
SPG11-210ENST00000558319 ATAD3AQ9NVI7 634 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ERVK-24P63145 666 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ZNF284Q2VY69 593 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 VPS37AQ8NEZ2 397 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 FIG4Q92562 907 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ZNF512BQ96KM6 892 aaPredicted RBP14.36□□□□□ -0.11
SPG11-210ENST00000558319 NUDT5Q9UKK9 219 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 TAF6LQ9Y6J9 622 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 GMFGO60234 142 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 KRT6BP04259 564 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 KRT6CP48668 564 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ARF5P84085 180 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 LY6KQ17RY6 165 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ADAM32Q8TC27 787 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 TFB1MQ8WVM0 346 aaKnown RBP14.36□□□□□ -0.11
SPG11-210ENST00000558319 KIFC1Q9BW19 673 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 SENP6Q9GZR1 1112 aaPredicted RBP14.36□□□□□ -0.11
SPG11-210ENST00000558319 PADI4Q9UM07 663 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ADGBQ8N7X0 1667 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 TPH1P17752 444 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 CENPCQ03188 943 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 CCNIQ14094 377 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 SEL1L3Q68CR1 1132 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 IZUMO1Q8IYV9 350 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 EPS8L2Q9H6S3 715 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 NRDE2Q9H7Z3 1164 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 PPCSQ9HAB8 311 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 SPAG6O75602 509 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ACAT1P24752 427 aaKnown RBP14.36□□□□□ -0.11
SPG11-210ENST00000558319 ITGB3BPQ13352 177 aaPredicted RBP14.36□□□□□ -0.11
SPG11-210ENST00000558319 TSC22D1Q15714 1073 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 AGKQ53H12 422 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ATG9AQ7Z3C6 839 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 ZBTB46Q86UZ6 589 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 RSPH1Q8WYR4 309 aa14.36□□□□□ -0.11
SPG11-210ENST00000558319 TSEN34Q9BSV6 310 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms