RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 CGNQ9P2M7 1197 aaKnown RBP11.31□□□□□ -0.6
SHF-203ENST00000558294 SLC6A14Q9UN76 642 aa11.31□□□□□ -0.6
SHF-203ENST00000558294 ASCC3Q8N3C0 2202 aaKnown RBP11.31□□□□□ -0.6
SHF-203ENST00000558294 IGHV1OR15-9A0A0B4J2B8 117 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 SPAARA0A1B0GVQ0 90 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 SRRM3A6NNA2 597 aaPredicted RBP11.3□□□□□ -0.6
SHF-203ENST00000558294 CUTAO60888 179 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 PHACTR2O75167 634 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 AP1G2O75843 785 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 BEST1O76090 585 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 CFIP05156 583 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 SERPINF2P08697 491 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 IRF1P10914 325 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 CASP1P29466 404 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 WASP42768 502 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 CLDN10P78369 228 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 GFPT1Q06210 699 aaPredicted RBP11.3□□□□□ -0.6
SHF-203ENST00000558294 ZNF33AQ06730 810 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 ZNF699Q32M78 642 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 ZNF667Q5HYK9 610 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 EGFLAMQ63HQ2 1017 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 ATL3Q6DD88 541 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 SHC4Q6S5L8 630 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 SLC36A4Q6YBV0 504 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 HTR3DQ70Z44 454 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 ACOT1Q86TX2 421 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 SLC41A1Q8IVJ1 513 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 ZCCHC14Q8WYQ9 949 aaKnown RBP11.3□□□□□ -0.6
SHF-203ENST00000558294 ELMO3Q96BJ8 720 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 TNIP3Q96KP6 325 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 ACOX2Q99424 681 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 SMOQ99835 787 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 GTPBP2Q9BX10 602 aaKnown RBP11.3□□□□□ -0.6
SHF-203ENST00000558294 MAGEF1Q9HAY2 307 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 CSNK1G1Q9HCP0 422 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 KRT82Q9NSB4 513 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 KLK13Q9UKR3 277 aa11.3□□□□□ -0.6
SHF-203ENST00000558294 LRRIQ3A6PVS8 624 aaPredicted RBP11.29□□□□□ -0.6
SHF-203ENST00000558294 PRRT4C9JH25 899 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 CACNG3O60359 315 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 TLR5O60602 858 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 EXOC3O60645 756 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 VNN1O95497 513 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 TBX18O95935 607 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 C4BPAP04003 597 aaKnown RBP11.29□□□□□ -0.6
SHF-203ENST00000558294 CCDC130P13994 396 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 NDUFV2P19404 249 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 AP3M2P53677 418 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 ATXN3P54252 364 aaPredicted RBP11.29□□□□□ -0.6
SHF-203ENST00000558294 FAM193AP78312 1265 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 SIM1P81133 766 aaPredicted RBP11.29□□□□□ -0.6
SHF-203ENST00000558294 BIRC3Q13489 604 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 NCOA4Q13772 614 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 KNOP1Q1ED39 458 aaKnown RBP11.29□□□□□ -0.6
SHF-203ENST00000558294 GRAMD4Q6IC98 578 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 SCARA5Q6ZMJ2 495 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 RABEPKQ7Z6M1 372 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 HDDC3Q8N4P3 179 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 MINDY1Q8N5J2 469 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 PARD3BQ8TEW8 1205 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 IPO4Q8TEX9 1081 aaKnown RBP11.29□□□□□ -0.6
SHF-203ENST00000558294 GABRG3Q99928 467 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
SHF-203ENST00000558294 NACA2Q9H009 215 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 BLZF1Q9H2G9 400 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 FBXO44Q9H4M3 255 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 SLC39A2Q9NP94 309 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 DNAJC17Q9NVM6 304 aaKnown RBP11.29□□□□□ -0.6
SHF-203ENST00000558294 MARK1Q9P0L2 795 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 RCOR1Q9UKL0 485 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 PCDHA7Q9UN72 937 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 MSRB2Q9Y3D2 182 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 ATP6V1DQ9Y5K8 247 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 PI4KAP42356 2102 aa11.29□□□□□ -0.6
SHF-203ENST00000558294 MYO18AQ92614 2054 aaKnown RBP11.28□□□□□ -0.6
SHF-203ENST00000558294 FAM221BA6H8Z2 402 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 NEDD8-MDP1E9PL57 170 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 POLR2DO15514 142 aaKnown RBP11.28□□□□□ -0.6
SHF-203ENST00000558294 OPHN1O60890 802 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 ZNF217O75362 1048 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 CD59P13987 128 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
SHF-203ENST00000558294 TYRP14679 529 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 MAP3K7CLP57077 242 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 KRT85P78386 507 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 ORC1Q13415 861 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 CUL4BQ13620 913 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 TPGS1Q6ZTW0 290 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 TOGARAM2Q6ZUX3 1019 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 CHPFQ8IZ52 775 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 CRYBG2Q8N1P7 616 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 TRIML1Q8N9V2 468 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 OR2I1PQ8NGU4 316 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 SLC2A14Q8TDB8 520 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 SPATA32Q96LK8 384 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 HSPA12BQ96MM6 686 aa11.28□□□□□ -0.6
SHF-203ENST00000558294 XPO6Q96QU8 1125 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms