RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 PJA1Q8NG27 643 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 FAM3CQ92520 227 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 ATP2A3Q93084 1043 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 HSFY1Q96LI6 401 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 CCSER2Q9H7U1 834 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 LTB4R2Q9NPC1 389 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 DUS2Q9NX74 493 aaKnown RBP13.14□□□□□ -0.31
SLIRP-211ENST00000557623 GTSE1Q9NYZ3 720 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 NAGPAQ9UK23 515 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 DAAM1Q9Y4D1 1078 aa13.14□□□□□ -0.31
SLIRP-211ENST00000557623 COL4A3Q01955 1670 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 A0A1W2PQH9 124 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 BECN2A8MW95 431 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 THAP12O43422 761 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 ZBED1O96006 694 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 RARGP13631 454 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 ZNF18P17022 549 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 MAGEA9P43362 315 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 ZNF165P49910 485 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 COPB1P53618 953 aaKnown RBP13.13□□□□□ -0.31
SLIRP-211ENST00000557623 BPIFB4P59827 614 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 APBA1Q02410 837 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 PTK2Q05397 1052 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 NR1H3Q13133 447 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 UBXN2BQ14CS0 331 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 KLHDC7AQ5VTJ3 777 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 SCML4Q8N228 414 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 CPA6Q8N4T0 437 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 SLC35F5Q8WV83 523 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 ZNF606Q8WXB4 792 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 SECISBP2LQ93073 1101 aaKnown RBP13.13□□□□□ -0.31
SLIRP-211ENST00000557623 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 ZSWIM1Q9BR11 485 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 FUCA2Q9BTY2 467 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 LSM14BQ9BX40 385 aaKnown RBP13.13□□□□□ -0.31
SLIRP-211ENST00000557623 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 EBF3Q9H4W6 596 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 PLCB1Q9NQ66 1216 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 CNGB3Q9NQW8 809 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
SLIRP-211ENST00000557623 SMPD4Q9NXE4 827 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 TBC1D14Q9P2M4 693 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 DNMT3LQ9UJW3 386 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 SH3BP1Q9Y3L3 701 aa13.13□□□□□ -0.31
SLIRP-211ENST00000557623 E2F8A0AVK6 867 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 SYCE3A1L190 88 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 LRRC10BA6NIK2 292 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 FAM170BA6NMN3 283 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 LGALS16A8MUM7 142 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 SPECC1L-ADORA2AF8WAN1 911 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 TULP2O00295 520 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 PI15O43692 258 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 NFATC1O95644 943 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 UCHL3P15374 230 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 CTHP32929 405 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 YWHAGP61981 247 aaKnown RBP eCLIP13.12□□□□□ -0.31
SLIRP-211ENST00000557623 ZXDBP98169 803 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 TNK2Q07912 1038 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 ADIGQ0VDE8 80 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 MMRN1Q13201 1228 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 RAPGEF1Q13905 1077 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 EML3Q32P44 896 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 TRIM68Q6AZZ1 485 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 DPY19L2P1Q6NXN4 242 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 OTUB2Q96DC9 234 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 NMUR1Q9HB89 426 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 HPS4Q9NQG7 708 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 OSER1Q9NX31 292 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 CFAP97Q9P2B7 532 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 WNT6Q9Y6F9 365 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 TRIOO75962 3097 aa13.12□□□□□ -0.31
SLIRP-211ENST00000557623 FOXN3O00409 490 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 FBXO21O94952 628 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 CAVIN2O95810 425 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 CALCAP01258 141 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 DCNP07585 359 aaKnown RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 LCP1P13796 627 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 ARSAP15289 507 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 CD72P21854 359 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 TARSP26639 723 aaKnown RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 GPD2P43304 727 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 ACADSBP45954 432 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 PGFP49763 221 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 TPM4P67936 248 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 DRAP1Q14919 205 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 C10orf120Q5SQS8 335 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 BTBD8Q5XKL5 378 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 PMF1Q6P1K2 205 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 RSRC2Q7L4I2 434 aaKnown RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 DHX40Q8IX18 779 aaKnown RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 FAM71AQ8IYT1 594 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 TTC8Q8TAM2 541 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 STK32AQ8WU08 396 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 IRGQQ8WZA9 623 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms