RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 PRICKLE2Q7Z3G6 844 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 OSTM1Q86WC4 334 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 DDX42Q86XP3 938 aaKnown RBP eCLIP10.68□□□□□ -0.7
ABCD4-227ENST00000557554 SPATA2LQ8IUW3 424 aaPredicted RBP10.68□□□□□ -0.7
ABCD4-227ENST00000557554 BBS7Q8IWZ6 715 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 DCBLD1Q8N8Z6 715 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 CXorf38Q8TB03 319 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 RFFLQ8WZ73 363 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 LGMNQ99538 433 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 ORAI3Q9BRQ5 295 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 TRIM4Q9C037 500 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 DNM3Q9UQ16 869 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 STON1Q9Y6Q2 735 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 MYH10P35580 1976 aa10.68□□□□□ -0.7
ABCD4-227ENST00000557554 LRRK2Q5S007 2527 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 USP9YO00507 2555 aaPredicted RBP10.67□□□□□ -0.7
ABCD4-227ENST00000557554 A0A1B0GTQ1 180 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 EPB41L2O43491 1005 aaKnown RBP10.67□□□□□ -0.7
ABCD4-227ENST00000557554 CACNG3O60359 315 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 DFNA5O60443 496 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 LDOC1O95751 146 aaPredicted RBP10.67□□□□□ -0.7
ABCD4-227ENST00000557554 OR52Z1P0C646 297 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 ACO1P21399 889 aaKnown RBP10.67□□□□□ -0.7
ABCD4-227ENST00000557554 ACOT2P49753 483 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 NCKAP1LP55160 1127 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 IL9RQ01113 521 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 TAF10Q12962 218 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 TRIM29Q14134 588 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 ANO4Q32M45 955 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 SV2CQ496J9 727 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 GRAMD4Q6IC98 578 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 VSTM1Q6UX27 236 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 GATAD2AQ86YP4 633 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 TMPRSS6Q8IU80 811 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 TMEM86AQ8N2M4 240 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 IGSF22Q8N9C0 903 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 EXD3Q8N9H8 876 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 NSUN7Q8NE18 718 aaKnown RBP10.67□□□□□ -0.7
ABCD4-227ENST00000557554 NAF1Q96HR8 494 aaKnown RBP10.67□□□□□ -0.7
ABCD4-227ENST00000557554 CNDP2Q96KP4 475 aaKnown RBP10.67□□□□□ -0.7
ABCD4-227ENST00000557554 TIPINQ9BVW5 301 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 TRIM9Q9C026 710 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 C6orf106Q9H6K1 298 aaPredicted RBP10.67□□□□□ -0.7
ABCD4-227ENST00000557554 TM9SF3Q9HD45 589 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 FBXO10Q9UK96 956 aa10.67□□□□□ -0.7
ABCD4-227ENST00000557554 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.67□□□□□ -0.7
ABCD4-227ENST00000557554 COCHO43405 550 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 MBL2P11226 248 aaPredicted RBP10.66□□□□□ -0.7
ABCD4-227ENST00000557554 LIG4P49917 911 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 ZNF132P52740 706 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 COPAP53621 1224 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 RAD51AP2Q09MP3 1159 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 TEAD4Q15561 434 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 SOWAHAQ2M3V2 549 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 BROXQ5VW32 411 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 LAYNQ6UX15 382 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 CRELD2Q6UXH1 353 aaPredicted RBP10.66□□□□□ -0.7
ABCD4-227ENST00000557554 ZNF574Q6ZN55 896 aaPredicted RBP10.66□□□□□ -0.7
ABCD4-227ENST00000557554 LIMS2Q7Z4I7 341 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 SAP25Q8TEE9 199 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 GTF3C6Q969F1 213 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 P2RY11Q96G91 374 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 ZNF578Q96N58 590 aaPredicted RBP10.66□□□□□ -0.7
ABCD4-227ENST00000557554 CRTAC1Q9NQ79 661 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 DNAJC17Q9NVM6 304 aaKnown RBP10.66□□□□□ -0.7
ABCD4-227ENST00000557554 GDAP2Q9NXN4 497 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 MAGEC2Q9UBF1 373 aaPredicted RBP10.66□□□□□ -0.7
ABCD4-227ENST00000557554 CREBBPQ92793 2442 aa10.66□□□□□ -0.7
ABCD4-227ENST00000557554 CKAP5Q14008 2032 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 TP53BP1Q12888 1972 aaPredicted RBP10.65□□□□□ -0.7
ABCD4-227ENST00000557554 UTP20O75691 2785 aaKnown RBP10.65□□□□□ -0.7
ABCD4-227ENST00000557554 K7ENP7 123 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 HNRNPDLO14979 420 aaKnown RBP10.65□□□□□ -0.7
ABCD4-227ENST00000557554 SUV39H1O43463 412 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 TSPAN3O60637 253 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 HUS1O60921 280 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 DXOO77932 396 aaKnown RBP10.65□□□□□ -0.7
ABCD4-227ENST00000557554 ABL1P00519 1130 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 TYRP14679 529 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 GLDCP23378 1020 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 BDNFP23560 247 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 LMO2P25791 158 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 ACSL1P33121 698 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 PNPLA4P41247 253 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 LHX1P48742 406 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 PCBP4P57723 403 aaKnown RBP10.65□□□□□ -0.7
ABCD4-227ENST00000557554 INSM1Q01101 510 aaPredicted RBP10.65□□□□□ -0.7
ABCD4-227ENST00000557554 MYL7Q01449 175 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 POU5F1Q01860 360 aaKnown RBP10.65□□□□□ -0.7
ABCD4-227ENST00000557554 ORC1Q13415 861 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 ILKQ13418 452 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 INAVAQ3KP66 663 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 PRAMEF14Q5SWL7 426 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 SNX30Q5VWJ9 437 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 INO80CQ6PI98 192 aaPredicted RBP10.65□□□□□ -0.7
ABCD4-227ENST00000557554 HTR3DQ70Z44 454 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 DHX40Q8IX18 779 aaKnown RBP10.65□□□□□ -0.7
ABCD4-227ENST00000557554 BIRC7Q96CA5 298 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 SIPA1Q96FS4 1042 aa10.65□□□□□ -0.7
ABCD4-227ENST00000557554 BICD1Q96G01 975 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms