RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CD19P15391 556 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 HOXB6P17509 224 aaKnown RBP5.07□□□□□ -1.6
VRK1-207ENST00000557352 TPH1P17752 444 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 CACNB3P54284 484 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 LINC00205P59089 165 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 CFHR1Q03591 330 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 MFSD13AQ14CX5 517 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 RNF220Q5VTB9 566 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 NXNQ6DKJ4 435 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 ANO7Q6IWH7 933 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 DEF8Q6ZN54 512 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 USP49Q70CQ1 688 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 PIP4P1Q86T03 277 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 SESTD1Q86VW0 696 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 YAF2Q8IY57 180 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 TCEAL8Q8IYN2 117 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 SAMD14Q8IZD0 417 aaPredicted RBP5.07□□□□□ -1.6
VRK1-207ENST00000557352 MAGEB6Q8N7X4 407 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 C11orf44Q8N8P7 122 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 NGDNQ8NEJ9 315 aaKnown RBP5.07□□□□□ -1.6
VRK1-207ENST00000557352 SMCR8Q8TEV9 937 aaPredicted RBP5.07□□□□□ -1.6
VRK1-207ENST00000557352 LRTOMTQ8WZ04 291 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 FAM83DQ9H4H8 585 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 OGDHLQ9ULD0 1010 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 ZMYM2Q9UBW7 1377 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 AQP7P3A6NL99 342 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 TLR2O60603 784 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 CYP19A1P11511 503 aaPredicted RBP5.06□□□□□ -1.6
VRK1-207ENST00000557352 MYF5P13349 255 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 BTF3P20290 206 aaKnown RBP5.06□□□□□ -1.6
VRK1-207ENST00000557352 NTSR1P30989 418 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 ID2Q02363 134 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 SLC14A1Q13336 389 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 POLD3Q15054 466 aaPredicted RBP5.06□□□□□ -1.6
VRK1-207ENST00000557352 PPP2R5AQ15172 486 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 PLEKHG6Q3KR16 790 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 PLAG1Q6DJT9 500 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 PNPLA1Q8N8W4 532 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 FAM156AQ8NDB6 213 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 APIPQ96GX9 242 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 ZNF668Q96K58 619 aaPredicted RBP5.06□□□□□ -1.6
VRK1-207ENST00000557352 HIST1H2AAQ96QV6 131 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 LRRC27Q9C0I9 530 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 FOXP1Q9H334 677 aaPredicted RBP5.06□□□□□ -1.6
VRK1-207ENST00000557352 EBF3Q9H4W6 596 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 ZNF287Q9HBT7 754 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 STEAP1Q9UHE8 339 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 DDX20Q9UHI6 824 aaKnown RBP5.06□□□□□ -1.6
VRK1-207ENST00000557352 MAFFQ9ULX9 164 aa5.06□□□□□ -1.6
VRK1-207ENST00000557352 CNOT3O75175 753 aaKnown RBP5.05□□□□□ -1.6
VRK1-207ENST00000557352 MAP4K4O95819 1239 aaPredicted RBP5.05□□□□□ -1.6
VRK1-207ENST00000557352 ADRA1DP25100 572 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 YPEL5P62699 121 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 GPC5P78333 572 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 SRSF1Q07955 248 aaKnown RBP eCLIP5.05□□□□□ -1.6
VRK1-207ENST00000557352 KCNAB1Q14722 419 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 ST3GAL2Q16842 350 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 CC2D1BQ5T0F9 858 aaKnown RBP5.05□□□□□ -1.6
VRK1-207ENST00000557352 CCDC149Q6ZUS6 474 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 UNC13DQ70J99 1090 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 C16orf71Q8IYS4 520 aaPredicted RBP5.05□□□□□ -1.6
VRK1-207ENST00000557352 NSMCE1Q8WV22 266 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 IGFBPL1Q8WX77 278 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 HEY2Q9UBP5 337 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 DNAJB11Q9UBS4 358 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 VPS51Q9UID3 782 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 ITGB1BP2Q9UKP3 347 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 FZD4Q9ULV1 537 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 SLC27A6Q9Y2P4 619 aa5.05□□□□□ -1.6
VRK1-207ENST00000557352 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.04□□□□□ -1.6
VRK1-207ENST00000557352 FYB1O15117 783 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 SNX2O60749 519 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 INMTO95050 263 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 CTSAP10619 480 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 RPS13P62277 151 aaKnown RBP5.04□□□□□ -1.6
VRK1-207ENST00000557352 RAPGEF1Q13905 1077 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 MANEALQ5VSG8 457 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 CLEC9AQ6UXN8 241 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 CHST15Q7LFX5 561 aaPredicted RBP5.04□□□□□ -1.6
VRK1-207ENST00000557352 ZDHHC17Q8IUH5 632 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 HIC2Q96JB3 615 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 VPS50Q96JG6 964 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 USP29Q9HBJ7 922 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 CAPN11Q9UMQ6 739 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 EID1Q9Y6B2 187 aa5.04□□□□□ -1.6
VRK1-207ENST00000557352 DCAF1Q9Y4B6 1507 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 ZCCHC6Q5VYS8 1495 aaKnown RBP5.03□□□□□ -1.6
VRK1-207ENST00000557352 GOLIM4O00461 696 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 TPP1O14773 563 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 PRAMEF2O60811 474 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 ZBED1O96006 694 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 HRGP04196 525 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 CARSP49589 748 aaKnown RBP5.03□□□□□ -1.6
VRK1-207ENST00000557352 COPAP53621 1224 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 EIF4A1P60842 406 aaKnown RBP5.03□□□□□ -1.6
VRK1-207ENST00000557352 CLCA4Q14CN2 919 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 KIAA0753Q2KHM9 967 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 LEXMQ3ZCV2 418 aa5.03□□□□□ -1.6
VRK1-207ENST00000557352 DARS2Q6PI48 645 aaKnown RBP5.03□□□□□ -1.6
VRK1-207ENST00000557352 CRELD2Q6UXH1 353 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms