RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 LRRC27Q9C0I9 530 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 UPF2Q9HAU5 1272 aaKnown RBP9.25□□□□□ -0.93
VRK1-206ENST00000557222 TRPC7Q9HCX4 862 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 RXFP3Q9NSD7 469 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 INTS13Q9NVM9 706 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 TRPM5Q9NZQ8 1165 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 SIX4Q9UIU6 781 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 FBXO2Q9UK22 296 aaPredicted RBP9.25□□□□□ -0.93
VRK1-206ENST00000557222 DNMT3AQ9Y6K1 912 aaPredicted RBP9.25□□□□□ -0.93
VRK1-206ENST00000557222 ANAPC1Q9H1A4 1944 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 ZNF233A6NK53 670 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 PCNX2A6NKB5 2137 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 K7EQS6 105 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 ALDH1A2O94788 518 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 TNNC2P02585 160 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 PROS1P07225 676 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 KRT19P08727 400 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 ARAFP10398 606 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 CSRP1P21291 193 aaKnown RBP9.24□□□□□ -0.93
VRK1-206ENST00000557222 WARSP23381 471 aaKnown RBP9.24□□□□□ -0.93
VRK1-206ENST00000557222 ACAT1P24752 427 aaKnown RBP9.24□□□□□ -0.93
VRK1-206ENST00000557222 DGKEP52429 567 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 SNRPFP62306 86 aaKnown RBP9.24□□□□□ -0.93
VRK1-206ENST00000557222 NOP14P78316 857 aaKnown RBP9.24□□□□□ -0.93
VRK1-206ENST00000557222 CREB5Q02930 508 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 BYSLQ13895 437 aaKnown RBP9.24□□□□□ -0.93
VRK1-206ENST00000557222 CCDC6Q16204 474 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 SDHAF4Q5VUM1 108 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 LRRC69Q6ZNQ3 347 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 SLCO4C1Q6ZQN7 724 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 DENND5BQ6ZUT9 1274 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 USP49Q70CQ1 688 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 OSTM1Q86WC4 334 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 DDX42Q86XP3 938 aaKnown RBP eCLIP9.24□□□□□ -0.93
VRK1-206ENST00000557222 SCN4BQ8IWT1 228 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 CCDC65Q8IXS2 484 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 ADGRG2Q8IZP9 1017 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 ARL14EPQ8N8R7 260 aaPredicted RBP9.24□□□□□ -0.93
VRK1-206ENST00000557222 OLIG1Q8TAK6 271 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 KBTBD7Q8WVZ9 684 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 SAAL1Q96ER3 474 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 HPDLQ96IR7 371 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 C8orf48Q96LL4 319 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 SLC22A12Q96S37 553 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 DUSP9Q99956 384 aaKnown RBP9.24□□□□□ -0.93
VRK1-206ENST00000557222 SYT15Q9BQS2 421 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 EDEM2Q9BV94 578 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 IKZF4Q9H2S9 585 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 LINC00597Q9H2U6 94 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 PDE11AQ9HCR9 933 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 EVLQ9UI08 416 aaPredicted RBP9.24□□□□□ -0.93
VRK1-206ENST00000557222 MMP17Q9ULZ9 603 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 WNT6Q9Y6F9 365 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 ZFYVE26Q68DK2 2539 aa9.24□□□□□ -0.93
VRK1-206ENST00000557222 NUP205Q92621 2012 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 C2orf78A6NCI8 922 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 ZNF840PA6NDX5 716 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.23□□□□□ -0.93
VRK1-206ENST00000557222 LEFTY2O00292 366 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 EFSO43281 561 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 TACC1O75410 805 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 OLFM2O95897 454 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 CEACAM1P13688 526 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 IDEP14735 1019 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 ANXA13P27216 316 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 GRIK1P39086 918 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 OPRD1P41143 372 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 TNFRSF4P43489 277 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 CDR1P51861 262 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 SNRPNP63162 240 aaKnown RBP9.23□□□□□ -0.93
VRK1-206ENST00000557222 PSMD2Q13200 908 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 CUL4AQ13619 759 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 CRY1Q16526 586 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 PREPLQ4J6C6 727 aaPredicted RBP9.23□□□□□ -0.93
VRK1-206ENST00000557222 LMBRD2Q68DH5 695 aaPredicted RBP9.23□□□□□ -0.93
VRK1-206ENST00000557222 WDR49Q8IV35 697 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 ZSWIM2Q8NEG5 633 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 MYCBPAPQ8TBZ2 947 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 OVCA2Q8WZ82 227 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 OTUB2Q96DC9 234 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 CBWD1Q9BRT8 395 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 MTMR12Q9C0I1 747 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 PANK4Q9NVE7 773 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 TBC1D14Q9P2M4 693 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 GPC6Q9Y625 555 aaPredicted RBP9.23□□□□□ -0.93
VRK1-206ENST00000557222 CLIC4Q9Y696 253 aa9.23□□□□□ -0.93
VRK1-206ENST00000557222 DSPP15924 2871 aaKnown RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 ASCC3Q8N3C0 2202 aaKnown RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 LNP1A1A4G5 178 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 GOLGA8IPA6NC78 632 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 TMEM8BA6NDV4 472 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 GOLGA8JA6NMD2 632 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 C4orf47A7E2U8 309 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 TNFRSF10BO14763 440 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 DCLK1O15075 740 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 EIF3DO15371 548 aaKnown RBP eCLIP9.22□□□□□ -0.93
VRK1-206ENST00000557222 OAS1P00973 400 aaKnown RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 BDNFP23560 247 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 LMO2P25791 158 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 GBP1P32455 592 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms