RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 LSRQ86X29 649 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-223ENST00000557076 LURAP1LQ8IV03 231 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 MFSD6LQ8IWD5 586 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 SRBD1Q8N5C6 995 aaKnown RBP5.24□□□□□ -1.57
SCFD1-223ENST00000557076 LNX1Q8TBB1 728 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-223ENST00000557076 IGDCC4Q8TDY8 1250 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 DEPDC1BQ8WUY9 529 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 B3GALT6Q96L58 329 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 PTCHD1Q96NR3 888 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 CEP89Q96ST8 783 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 FDXACB1Q9BRP7 624 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-223ENST00000557076 TTPALQ9BTX7 342 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 EDEM2Q9BV94 578 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 APOL6Q9BWW8 343 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 SMOC1Q9H4F8 434 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 SLC32A1Q9H598 525 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 IFT122Q9HBG6 1241 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 TMEM9BQ9NQ34 198 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 AGPAT5Q9NUQ2 364 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 C2orf42Q9NWW7 574 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 MIOSQ9NXC5 875 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 GABBR1Q9UBS5 961 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 ADAM28Q9UKQ2 775 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 KLK13Q9UKR3 277 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 MYRFQ9Y2G1 1151 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 GIT1Q9Y2X7 761 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 MIA3Q5JRA6 1907 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 PIEZO2Q9H5I5 2752 aa5.24□□□□□ -1.57
SCFD1-223ENST00000557076 ASCC3Q8N3C0 2202 aaKnown RBP5.24□□□□□ -1.57
SCFD1-223ENST00000557076 HECTD1Q9ULT8 2610 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 CFAP46Q8IYW2 2715 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 LNP1A1A4G5 178 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 MYBPHLA2RUH7 354 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 FAM86B1E9PN63 330 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 DDX39AO00148 427 aaKnown RBP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 ATG13O75143 517 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 TADA2AO75478 443 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 FAM86B2P0C5J1 330 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 CCDC192P0DO97 292 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 ATF2P15336 505 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 CD247P20963 164 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 GDI1P31150 447 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 ZNF76P36508 570 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 SREBF1P36956 1147 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 PRR5P85299 388 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 DRP2Q13474 957 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 PCBP1Q15365 356 aaKnown RBP eCLIP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 SLC5A9Q2M3M2 681 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 TDRD10Q5VZ19 366 aaKnown RBP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 TCEAL6Q6IPX3 200 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 PRSS55Q6UWB4 352 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 SRGAP1Q7Z6B7 1085 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 RALGPS2Q86X27 583 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 PLA2G4DQ86XP0 818 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 TMTC2Q8N394 836 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 CAMKK1Q8N5S9 505 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 LSM14AQ8ND56 463 aaKnown RBP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 GSTCDQ8NEC7 633 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 CTCFLQ8NI51 663 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 SLC7A14Q8TBB6 771 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 SMARCD2Q92925 531 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 BRF1Q92994 677 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 TCEAL3Q969E4 200 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 E2F7Q96AV8 911 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 FCRL3Q96P31 734 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 GAD1Q99259 594 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 SPATA25Q9BR10 227 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 GLT8D2Q9H1C3 349 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 TMPRSS5Q9H3S3 457 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 RIC8AQ9NPQ8 531 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 RBM12Q9NTZ6 932 aaKnown RBP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 HCFC1R1Q9NWW0 138 aa5.23□□□□□ -1.57
SCFD1-223ENST00000557076 SUCLA2Q9P2R7 463 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-223ENST00000557076 SPAG17Q6Q759 2223 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 IGLV3-22A0A075B6J6 115 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 ARHGEF37A1IGU5 675 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 WDR27A2RRH5 827 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 F8W810 466 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 CCER2I3L3R5 266 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 CHADO15335 359 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 ADAM12O43184 909 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 EXTL3O43909 919 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 MAFO75444 373 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-223ENST00000557076 DDAH1O94760 285 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 STBD1O95210 358 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 CD3EP07766 207 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 AXLP30530 894 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 HOXC13P31276 330 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 OR1D2P34982 312 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 IRX4P78413 519 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 CREB5Q02930 508 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 SCAPQ12770 1279 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 ELAVL2Q12926 359 aaKnown RBP5.22□□□□□ -1.57
SCFD1-223ENST00000557076 ELF2Q15723 593 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 VITQ6UXI7 678 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 Q6ZS52 159 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 B3GNT8Q7Z7M8 397 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 PIP4P1Q86T03 277 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 RHPN2Q8IUC4 686 aa5.22□□□□□ -1.57
SCFD1-223ENST00000557076 DEFB124Q8NES8 71 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms