RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.83□□□□□ -0.52
SRP54-213ENST00000556994 FNIP1Q8TF40 1166 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 CDHR1Q96JP9 859 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 C7orf26Q96N11 449 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 TEPSINQ96N21 525 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 TUBGCP5Q96RT8 1024 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 PCYT2Q99447 389 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 ADPGKQ9BRR6 497 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 CCDC106Q9BWC9 280 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 APOL6Q9BWW8 343 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 SHCBP1LQ9BZQ2 653 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 WWP1Q9H0M0 922 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 TMEM134Q9H6X4 195 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 POPDC2Q9HBU9 364 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 ANGPTL2Q9UKU9 493 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 ZNF214Q9UL59 606 aaPredicted RBP11.83□□□□□ -0.52
SRP54-213ENST00000556994 FER1L6Q2WGJ9 1857 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 HMX2A2RU54 273 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 F5H423 210 aaPredicted RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 OGTO15294 1046 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 CHADO15335 359 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 LYPLA1O75608 230 aaPredicted RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 MICAL2O94851 1124 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 HMGCRP04035 888 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 LYNP07948 512 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 GJB1P08034 283 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 C6orf222P0C671 652 aaPredicted RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 OSBPP22059 807 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 AP3M2P53677 418 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 HMGCS2P54868 508 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 CNTN2Q02246 1040 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 C16orf46Q6P387 395 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 MYLK4Q86YV6 388 aaPredicted RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 POU5F2Q8N7G0 328 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 REPS2Q8NFH8 660 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 PYDC1Q8WXC3 89 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 USP6NLQ92738 828 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 MTBPQ96DY7 904 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 ACO2Q99798 780 aaKnown RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 TRIM4Q9C037 500 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 SMYD3Q9H7B4 428 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 SIRPGQ9P1W8 387 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 COL11A1P12107 1806 aaPredicted RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 ARHGAP42A6NI28 874 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 M0QYV0 167 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 ITM2AO43736 263 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 LGR5O75473 907 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 IL1BP01584 269 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 GRIA1P42261 906 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 ACTR3P61158 418 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 DSG1Q02413 1049 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 C6orf163Q5TEZ5 329 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 FAM91A1Q658Y4 838 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 UNC5AQ6ZN44 842 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 CYP4V2Q6ZWL3 525 aaPredicted RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 RAPH1Q70E73 1250 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 APLFQ8IW19 511 aaPredicted RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 MFN1Q8IWA4 741 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 UNC5BQ8IZJ1 945 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 PLD5Q8N7P1 536 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 SLC4A11Q8NBS3 891 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 RNF149Q8NC42 400 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 GBP5Q96PP8 586 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 ECSITQ9BQ95 431 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 LHX5Q9H2C1 402 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 MYOZ2Q9NPC6 264 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 ASNSD1Q9NWL6 643 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 NDE1Q9NXR1 346 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 SLC17A6Q9P2U8 582 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 HBS1LQ9Y450 684 aaKnown RBP11.82□□□□□ -0.52
SRP54-213ENST00000556994 PPME1Q9Y570 386 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 NR2E3Q9Y5X4 410 aa11.82□□□□□ -0.52
SRP54-213ENST00000556994 A0A1B0GVG6 124 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 SLC15A5A6NIM6 579 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 F8W8V4 182 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 B4GALT5O43286 388 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 MED7O43513 233 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 SPAG6O75602 509 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 PRKCBP05771 671 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 GSTA2P09210 222 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 PDGFRAP16234 1089 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 AP2B1P63010 937 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 PDE1BQ01064 536 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 KRT81Q14533 505 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 TMEM132AQ24JP5 1023 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 TRMT5Q32P41 509 aaKnown RBP11.81□□□□□ -0.52
SRP54-213ENST00000556994 RALGPS1Q5JS13 557 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 PRAMEF18Q5VWM3 479 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 ZPBP2Q6X784 338 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 RXFP2Q8WXD0 754 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 RNF157Q96PX1 679 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 ELOVL4Q9GZR5 314 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 PNPLA8Q9NP80 782 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 ETNK2Q9NVF9 386 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 PAK5Q9P286 719 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 A0A088AWK7 358 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 ZBED1O96006 694 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 TNNC2P02585 160 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms