RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 A1CFQ9NQ94 594 aaKnown RBP4.84□□□□□ -1.63
SRP54-212ENST00000556992 NRBP2Q9NSY0 501 aa4.84□□□□□ -1.63
SRP54-212ENST00000556992 TYW1Q9NV66 732 aaKnown RBP4.84□□□□□ -1.63
SRP54-212ENST00000556992 MYO1AQ9UBC5 1043 aa4.84□□□□□ -1.63
SRP54-212ENST00000556992 CDC42EP3Q9UKI2 254 aa4.84□□□□□ -1.63
SRP54-212ENST00000556992 FZD1Q9UP38 647 aa4.84□□□□□ -1.63
SRP54-212ENST00000556992 EXOC7Q9UPT5 735 aa4.84□□□□□ -1.63
SRP54-212ENST00000556992 AGTPBP1Q9UPW5 1226 aa4.84□□□□□ -1.63
SRP54-212ENST00000556992 FRMD4BQ9Y2L6 1034 aa4.84□□□□□ -1.63
SRP54-212ENST00000556992 PHLPP2Q6ZVD8 1323 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 RASSF10A6NK89 507 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 DDX39AO00148 427 aaKnown RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 PRODHO43272 600 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 HIP1RO75146 1068 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 PRPF6O94906 941 aaKnown RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 NDUFA10O95299 355 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 CCNE2O96020 404 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 AFPP02771 609 aaKnown RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 MYBP10242 640 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 EPB41P11171 864 aaKnown RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 CETPP11597 493 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 KCNA2P16389 499 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 NMT1P30419 496 aaKnown RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 CASQ1P31415 396 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 HOXD13P35453 343 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 MSX2P35548 267 aaPredicted RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 CYLC1P35663 651 aaPredicted RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 RARRES1P49788 294 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 ACTR2P61160 394 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 GNG11P61952 73 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 HERVK_113P62684 666 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 CCNA1P78396 465 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 GOLGA8FQ08AF8 430 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 GOLGA8DPQ0D2H9 430 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 CETN1Q12798 172 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 FOXL1Q12952 345 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 NEDD9Q14511 834 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 KCTD2Q14681 263 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 SPA17Q15506 151 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 FXNQ16595 210 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 MEA1Q16626 185 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 XKR9Q5GH70 373 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 XKR3Q5GH77 459 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 HABP4Q5JVS0 413 aaKnown RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 TREML2Q5T2D2 321 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 MAMDC4Q6UXC1 1216 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 ABHD15Q6UXT9 468 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 RAD9BQ6WBX8 426 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 SYT10Q6XYQ8 523 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 ZNF662Q6ZS27 426 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 ZNF627Q7L945 461 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 EEPD1Q7L9B9 569 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 CACNA2D4Q7Z3S7 1137 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 ZNF575Q86XF7 245 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 FMNL3Q8IVF7 1028 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 EXOC8Q8IYI6 725 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 CELF2-AS1Q8N7Q2 184 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 MCPH1Q8NEM0 835 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 SHCBP1Q8NEM2 672 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 WNK4Q96J92 1243 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 STRA6Q9BX79 667 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 NHEJ1Q9H9Q4 299 aaPredicted RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 PLCB1Q9NQ66 1216 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 TLR9Q9NR96 1032 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 FAM207AQ9NSI2 230 aaPredicted RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 DMAC2Q9NW81 257 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 BTBD7Q9P203 1132 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 WRAP73Q9P2S5 460 aaPredicted RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 HECAQ9UBI9 543 aaPredicted RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 GABBR1Q9UBS5 961 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 SLC9A2Q9UBY0 812 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 PRKAG3Q9UGI9 489 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 DNAI1Q9UI46 699 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 SIK3Q9Y2K2 1263 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 SLC45A1Q9Y2W3 748 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 DAAM1Q9Y4D1 1078 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 BZW2Q9Y6E2 419 aaKnown RBP4.83□□□□□ -1.64
SRP54-212ENST00000556992 SLC30A1Q9Y6M5 507 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 MYH2Q9UKX2 1941 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 CCDC88AQ3V6T2 1871 aa4.83□□□□□ -1.64
SRP54-212ENST00000556992 BAZ2AQ9UIF9 1905 aaKnown RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 MYH13Q9UKX3 1938 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 UQCRHLA0A096LP55 91 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 GTPBP10A4D1E9 387 aaKnown RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 RSPH10B2B2RC85 870 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 EIF3CLB5ME19 914 aaKnown RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 MAPK13O15264 365 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 TGFB1I1O43294 461 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 CTIFO43310 598 aaKnown RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 STRNO43815 780 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 EXOC3O60645 756 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 USO1O60763 962 aaKnown RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 AKAP3O75969 853 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 SOD2P04179 222 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 UQCRHP07919 91 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 SUPT20HL2P0C7V6 817 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 CCDC172P0C7W6 258 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 RSPH10BP0C881 870 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 KRT13P13646 458 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms