RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 GCLMP48507 274 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 SLC5A3P53794 718 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 CACNA2D1P54289 1103 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 WDR4P57081 412 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 SLC7A9P82251 487 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 PUM1Q14671 1186 aaKnown RBP eCLIP8.14□□□□□ -1.116e-12■□□□□ 10.8
HNRNPC-226ENST00000556628 LPAL2Q16609 132 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 EDRF1Q3B7T1 1238 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 WDR44Q5JSH3 913 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 HECTD3Q5T447 861 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 TCERG1LQ5VWI1 586 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 KRT39Q6A163 491 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 SPOPLQ6IQ16 392 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 ERMP1Q7Z2K6 904 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 WDR5BQ86VZ2 330 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 CRYBG2Q8N1P7 616 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 CAMKK1Q8N5S9 505 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 ARMC2Q8NEN0 867 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 RPLP0P6Q8NHW5 317 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 SLC2A14Q8TDB8 520 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 GLMNQ92990 594 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 ELMO3Q96BJ8 720 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 CHFRQ96EP1 664 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 KCNK16Q96T55 309 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 NT5C1AQ9BXI3 368 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 NIF3L1Q9GZT8 377 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 LINC00597Q9H2U6 94 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 FBXO44Q9H4M3 255 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 CYP3A43Q9HB55 503 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 TMEM8AQ9HCN3 771 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.14□□□□□ -1.112e-7■■■■■ 31.7
HNRNPC-226ENST00000556628 TLR8Q9NR97 1041 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 KRT82Q9NSB4 513 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 FAM49BQ9NUQ9 324 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 SMPD4Q9NXE4 827 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 TBC1D14Q9P2M4 693 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 CHORDC1Q9UHD1 332 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 SH3BP1Q9Y3L3 701 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 MYO16Q9Y6X6 1858 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 ZFHX2Q9C0A1 2572 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 CCDC163A0A0D9SF12 145 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 E2F8A0AVK6 867 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 PRR5-ARHGAP8B1AHC4 643 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 LRP3O75074 770 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 OLFM2O95897 454 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 RETP07949 1114 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 CCDC130P13994 396 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 CD58P19256 250 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 GTF2H1P32780 548 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 ASPAP45381 313 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 MXI1P50539 228 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 MAP3K7CLP57077 242 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 ARHGAP8P85298 464 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 LMNB2Q03252 620 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 PPP3CAQ08209 521 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 GOLGA8FQ08AF8 430 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 DMWDQ09019 674 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 GOLGA8DPQ0D2H9 430 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 ORC1Q13415 861 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 PNOCQ13519 176 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 STIM1Q13586 685 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 PREPLQ4J6C6 727 aaPredicted RBP8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 BTBD8Q5XKL5 378 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 PAQR9Q6ZVX9 377 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 FILIP1Q7Z7B0 1213 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 FUKQ8N0W3 1084 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 TTC39CQ8N584 583 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 FAM174AQ8TBP5 190 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 TAS1R2Q8TE23 839 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 SMARCE1Q969G3 411 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 OTUB2Q96DC9 234 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 CYFIP2Q96F07 1278 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 FAXDC2Q96IV6 333 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 CALR3Q96L12 384 aaKnown RBP8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 GBP4Q96PP9 640 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 GSDMAQ96QA5 445 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 OCSTAMPQ9BR26 566 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 RNF38Q9H0F5 515 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 FBRSL1Q9HCM7 1045 aaKnown RBP8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 CSNK1G1Q9HCP0 422 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 TMEM30AQ9NV96 361 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 CFAP97Q9P2B7 532 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 F5P12259 2224 aa8.13□□□□□ -1.11
HNRNPC-226ENST00000556628 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 TNFRSF10BO14763 440 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 COCHO43405 550 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 FOXD2O60548 495 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 RPP40O75818 363 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 APODP05090 189 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 CYP17A1P05093 508 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 ADH5P11766 374 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 PTMSP20962 102 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 ATP5C1P36542 298 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 EIF2DP41214 584 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 PPP1R2P41236 205 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 PRCPP42785 496 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 PXNP49023 591 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 TUBP50607 506 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 DGKEP52429 567 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 SLC8A3P57103 927 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms