RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 H0YIV9 168 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 MASP2O00187 686 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 RGS13O14921 159 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 KCNN4O15554 427 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 MTSS1O43312 755 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 SMAD6O43541 496 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 PSIP1O75475 530 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 HTR3BO95264 441 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 CCDC192P0DO97 292 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 PYGMP11217 842 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 PABPC1P11940 636 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 ANXA8P13928 327 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 SERPINB3P29508 390 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 NTF4P34130 210 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 GPD2P43304 727 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ASPAP45381 313 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 HNRNPFP52597 415 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 GNG2P59768 71 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 PSMC5P62195 406 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 KRT32Q14532 448 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 TTLL4Q14679 1199 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 SLC9A5Q14940 896 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 EZH2Q15910 746 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 ASIC2Q16515 512 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ARHGAP44Q17R89 818 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 RTP2Q5QGT7 225 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 C6orf163Q5TEZ5 329 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ANXA8L1Q5VT79 327 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ANO7Q6IWH7 933 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 DUS1LQ6P1R4 473 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 CATSPERGQ6ZRH7 1159 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 PRR23CQ6ZRP0 262 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 RGS9BPQ6ZS82 235 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 CD163Q86VB7 1156 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 TXNRD3Q86VQ6 643 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 TSPYL5Q86VY4 417 aaPredicted RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 KRT73Q86Y46 540 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 TICAM1Q8IUC6 712 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 UNC45BQ8IWX7 931 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ARL14Q8N4G2 192 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 CCDC33Q8N5R6 958 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ATP6V0D2Q8N8Y2 350 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 FAM133AQ8N9E0 248 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 PDZD8Q8NEN9 1154 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 RNF139Q8WU17 664 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 WASF1Q92558 559 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 BRF1Q92994 677 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 PPP1R13BQ96KQ4 1090 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 FBXL18Q96ME1 805 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 TMEM68Q96MH6 324 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 STRBPQ96SI9 672 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 BTBD2Q9BX70 525 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 GCOM2Q9BZD3 368 aaPredicted RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.44□□□□□ -1.38
TDP1-215ENST00000556498 TFB2MQ9H5Q4 396 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 PIDD1Q9HB75 910 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 FAM105AQ9NUU6 356 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 INTS9Q9NV88 658 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 ASNSD1Q9NWL6 643 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 SYBUQ9NX95 663 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 HMG20BQ9P0W2 317 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 THEGQ9P2T0 379 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 FETUBQ9UGM5 382 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ANGPTL2Q9UKU9 493 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ZNRF3Q9ULT6 936 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 SNX7Q9UNH6 387 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ERVK-19Q9WJR5 959 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 AP3M1Q9Y2T2 418 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 PCDHGA3Q9Y5H0 932 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 ARHGAP35Q9NRY4 1499 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 PRDM15P57071 1507 aaPredicted RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 NSD2O96028 1365 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 LRPPRCP42704 1394 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 SH3PXD2BA1X283 911 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CTAGE15A4D2H0 777 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 SMCO2A6NFE2 343 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 EFCAB10A6NFE3 127 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ZSCAN5BA6NJL1 495 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 HSBP1L1C9JCN9 74 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 PRSS44E7EML9 344 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 AP3D1O14617 1153 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 SLC9A3R1O14745 358 aaPredicted RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 CAPN9O14815 690 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 POLR1CO15160 346 aaPredicted RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 TXNL1O43396 289 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 LRRN2O75325 713 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ESRRBO95718 433 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CLPTM1O96005 669 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CHGBP05060 677 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 IL6P05231 212 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ANXA6P08133 673 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 GSTM1P09488 218 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CTAGE8P0CG41 777 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 POU2F1P14859 743 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ANPEPP15144 967 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ALOX12P18054 663 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 PLCG1P19174 1290 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 HLA-FP30511 346 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ETV5P41161 510 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 STAT1P42224 750 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms