RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 DENND1BQ6P3S1 775 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 WDTC1Q8N5D0 677 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 SECISBP2LQ93073 1101 aaKnown RBP10.16□□□□□ -0.78
SRP54-210ENST00000556380 FAM83CQ9BQN1 747 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 TRMT61BQ9BVS5 477 aaKnown RBP10.16□□□□□ -0.78
SRP54-210ENST00000556380 C1QTNF1Q9BXJ1 281 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 CCSER2Q9H7U1 834 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 TRPC7Q9HCX4 862 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 CYLDQ9NQC7 956 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 HESX1Q9UBX0 185 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 CYTH4Q9UIA0 394 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 ZNF638Q14966 1978 aaKnown RBP10.15□□□□□ -0.78
SRP54-210ENST00000556380 ANAPC1Q9H1A4 1944 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 A0A1W2PQH9 124 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 F8VZ95 297 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 CHADO15335 359 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 COCHO43405 550 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 TBX18O95935 607 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 ZBED1O96006 694 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 PDGFBP01127 241 aaPredicted RBP10.15□□□□□ -0.78
SRP54-210ENST00000556380 CKMP06732 381 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 GDI1P31150 447 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 USP8P40818 1118 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 PDE6CP51160 858 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 TKTL1P51854 596 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 SLC8A3P57103 927 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 PTK2Q05397 1052 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 USP4Q13107 963 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 ZNF77Q15935 545 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 SLC44A4Q53GD3 710 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 TMEM31Q5JXX7 168 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 HFE2Q6ZVN8 426 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 SLC47A2Q86VL8 602 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 SCML4Q8N228 414 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 KIAA1958Q8N8K9 716 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 BPIFB1Q8TDL5 484 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 STK32AQ8WU08 396 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 DDX1Q92499 740 aaKnown RBP10.15□□□□□ -0.78
SRP54-210ENST00000556380 NDRG1Q92597 394 aaKnown RBP10.15□□□□□ -0.78
SRP54-210ENST00000556380 DNASE1L2Q92874 299 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 HSFY1Q96LI6 401 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 LRFN3Q9BTN0 628 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 DDX23Q9BUQ8 820 aaKnown RBP10.15□□□□□ -0.78
SRP54-210ENST00000556380 ULBP1Q9BZM6 244 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 LHX5Q9H2C1 402 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 KIF9Q9HAQ2 790 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 TLR8Q9NR97 1041 aaKnown RBP10.15□□□□□ -0.78
SRP54-210ENST00000556380 FAM207AQ9NSI2 230 aaPredicted RBP10.15□□□□□ -0.78
SRP54-210ENST00000556380 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.15□□□□□ -0.78
SRP54-210ENST00000556380 CLIC5Q9NZA1 410 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 PCDHGC3Q9UN70 934 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 DAAM1Q9Y4D1 1078 aa10.15□□□□□ -0.78
SRP54-210ENST00000556380 PRR33A8MZF0 331 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 M0QYV0 167 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 LEFTY2O00292 366 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 ZNF263O14978 683 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 THAP12O43422 761 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 MED7O43513 233 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 GREM1O60565 184 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 TLR5O60602 858 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 ABL1P00519 1130 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 RARGP13631 454 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 CYP11B1P15538 503 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 RGS7P49802 495 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 MLLT6P55198 1093 aaPredicted RBP10.14□□□□□ -0.79
SRP54-210ENST00000556380 STARD6P59095 220 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 BPIFB4P59827 614 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 ZNF445P59923 1031 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 POLR2FP61218 127 aaKnown RBP10.14□□□□□ -0.79
SRP54-210ENST00000556380 FANCCQ00597 558 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 PFKPQ01813 784 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 RAPGEF1Q13905 1077 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 ARHGAP29Q52LW3 1261 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 KLHDC10Q6PID8 442 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 LRSAM1Q6UWE0 723 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 TMEM110Q86TL2 294 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 FAM160A2Q8N612 972 aaPredicted RBP10.14□□□□□ -0.79
SRP54-210ENST00000556380 SH3RF2Q8TEC5 729 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 IRF7Q92985 503 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 WBP2Q969T9 261 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 ZFYVE19Q96K21 471 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 BRD9Q9H8M2 597 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 LRRC4Q9HBW1 653 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 HPS4Q9NQG7 708 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 CNGB3Q9NQW8 809 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 GKN1Q9NS71 199 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 CPQQ9Y646 472 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 OBSL1O75147 1896 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 ZNF318Q5VUA4 2279 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 PATJQ8NI35 1801 aa10.14□□□□□ -0.79
SRP54-210ENST00000556380 A0A1W2PQC6 194 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 OTOL1A6NHN0 477 aaPredicted RBP10.13□□□□□ -0.79
SRP54-210ENST00000556380 YJEFN3A6XGL0 299 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 E7ENQ6 273 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 SOX5P35711 763 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 PBX1P40424 430 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 DAOAP59103 153 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 YWHAGP61981 247 aaKnown RBP eCLIP10.13□□□□□ -0.79
SRP54-210ENST00000556380 PRR20EP86478 221 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 PRR20CP86479 221 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms