RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 HYAL1Q12794 435 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 SEPT7Q16181 437 aaKnown RBP3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 SHROOM1Q2M3G4 852 aaPredicted RBP3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 ATP13A4Q4VNC1 1196 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 TRIM61Q5EBN2 209 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 SYCP2LQ5T4T6 812 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 KIAA1614Q5VZ46 1190 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 APOBEC3HQ6NTF7 200 aaKnown RBP3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 ZCCHC8Q6NZY4 707 aaKnown RBP3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 DRICH1Q6PGQ1 229 aaPredicted RBP3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 DEFB128Q7Z7B8 93 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 ANKRD18AQ8IVF6 992 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 HERC6Q8IVU3 1022 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 SCYL3Q8IZE3 742 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 IGSF22Q8N9C0 903 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 JPH3Q8WXH2 748 aaPredicted RBP3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 CHMP4CQ96CF2 233 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 PAGR1Q9BTK6 254 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 ADGRE3Q9BY15 652 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 EPC1Q9H2F5 836 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 XPNPEP3Q9NQH7 507 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 STARD7Q9NQZ5 370 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 THG1LQ9NWX6 298 aaKnown RBP3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 LUC7L2Q9Y383 392 aaKnown RBP3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 COMMD10Q9Y6G5 202 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 C2CD3Q4AC94 2353 aa3.54□□□□□ -1.84
EFCAB11-210ENST00000556078 GRIN2DO15399 1336 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 DOPEY2Q9Y3R5 2298 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 GREB1Q4ZG55 1949 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 LINC01553A4QN01 128 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 ZNF891A8MT65 544 aaPredicted RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 M0R2C6 588 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 EIF3JO75822 258 aaKnown RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 FSBPO95073 299 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 FKBP9O95302 570 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 MT-CO1P00395 513 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 HOXC6P09630 235 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 SPATA31D3P0C874 917 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 EIF2S2P20042 333 aaKnown RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 SP100P23497 879 aaPredicted RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 KPNA1P52294 538 aaPredicted RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 RNASE9P60153 205 aaKnown RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 ERVK-21P61565 698 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 FKBP1AP62942 108 aaKnown RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 DEFB103AP81534 67 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 IRF9Q00978 393 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 OCRLQ01968 901 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 NHLH2Q02577 135 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 SPP2Q13103 211 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 PIN1Q13526 163 aaPredicted RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 GRB14Q14449 540 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 ABCB5Q2M3G0 1257 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 GFOD2Q3B7J2 385 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 KLHL22Q53GT1 634 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 TTC38Q5R3I4 469 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 SYDE2Q5VT97 1194 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 PGM2L1Q6PCE3 622 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 CCDC174Q6PII3 467 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 SPATA31D4Q6ZUB0 917 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 FKBP9P1Q75LS8 142 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 CCDC105Q8IYK2 499 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 SLC44A3Q8N4M1 653 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 KLHDC9Q8NEP7 349 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 GPRC5AQ8NFJ5 357 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 TDRD7Q8NHU6 1098 aaKnown RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 TTC8Q8TAM2 541 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 MSLNLQ96KJ4 702 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 RPGRIP1Q96KN7 1286 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 LRGUKQ96M69 825 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 TEX101Q9BY14 249 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 PITHD1Q9GZP4 211 aaPredicted RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 HIPK3Q9H422 1215 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 GREM2Q9H772 168 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 ING3Q9NXR8 418 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 CDH22Q9UJ99 828 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 HDAC5Q9UQL6 1122 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 APOBEC2Q9Y235 224 aaKnown RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 COQ6Q9Y2Z9 468 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 SPEF1Q9Y4P9 236 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 MRFAP1Q9Y605 127 aa3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.53□□□□□ -1.84
EFCAB11-210ENST00000556078 PLXNB3Q9ULL4 1909 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 SYNRGQ9UMZ2 1314 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 SPENQ96T58 3664 aaKnown RBP3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 A0A0A6YYJ9 748 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 UBA6A0AVT1 1052 aaPredicted RBP3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 TRIM38O00635 465 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 MAFGO15525 162 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 XPOTO43592 962 aaKnown RBP3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 CSPG5O95196 566 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 POU3F2P20265 443 aaPredicted RBP3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 FDXRP22570 491 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 MAPK4P31152 587 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 ICAM3P32942 547 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 RRP1P56182 461 aaKnown RBP3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 UBE4AQ14139 1066 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 ACAP2Q15057 778 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 COL28A1Q2UY09 1125 aa3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 PDCD4Q53EL6 469 aaKnown RBP3.52□□□□□ -1.85
EFCAB11-210ENST00000556078 MFSD14BQ5SR56 506 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms